Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC108734.2-201ENST00000420887 1069 ntBASIC18.26■□□□□ 0.51
RC3H1Q5TC82 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 FAM86KP-201ENST00000509817 987 ntBASIC18.26■□□□□ 0.51
RC3H1Q5TC82 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 AC005586.2-201ENST00000563946 837 ntBASIC18.26■□□□□ 0.51
RC3H1Q5TC82 SNORD3B-1-201ENST00000577988 758 ntBASIC18.26■□□□□ 0.51
RC3H1Q5TC82 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 AC011270.2-201ENST00000624293 2550 ntBASIC18.26■□□□□ 0.51
RC3H1Q5TC82 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RC3H1Q5TC82 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 OR2A1-AS1-210ENST00000496968 531 ntBASIC18.25■□□□□ 0.51
RC3H1Q5TC82 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 THY1-209ENST00000580275 578 ntTSL 3 BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 AL021707.6-201ENST00000609212 491 ntBASIC18.25■□□□□ 0.51
RC3H1Q5TC82 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 AC067931.2-201ENST00000623655 2003 ntBASIC18.25■□□□□ 0.51
RC3H1Q5TC82 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.25■□□□□ 0.51
RC3H1Q5TC82 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 AC006987.1-201ENST00000413610 527 ntBASIC18.24■□□□□ 0.51
RC3H1Q5TC82 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 AP003392.6-201ENST00000607709 325 ntBASIC18.24■□□□□ 0.51
RC3H1Q5TC82 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.24■□□□□ 0.51
RC3H1Q5TC82 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 FUCA1P1-201ENST00000374476 1351 ntBASIC18.23■□□□□ 0.51
RC3H1Q5TC82 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 SURF4-203ENST00000371991 715 ntTSL 3 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC18.23■□□□□ 0.51
RC3H1Q5TC82 DDX39AP1-201ENST00000445147 1181 ntBASIC18.23■□□□□ 0.51
RC3H1Q5TC82 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms