Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 FAM90A24P-201ENST00000520792 2369 ntBASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 CETP-203ENST00000566128 1733 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 CLK3P2-201ENST00000427566 1453 ntBASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 DRD5P1-201ENST00000456605 1438 ntBASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 MIR574-201ENST00000385209 96 ntBASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 NUS1P3-201ENST00000423502 862 ntBASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 AC044860.1-202ENST00000559481 777 ntBASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 AC092337.1-201ENST00000568699 1129 ntBASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 AC111170.3-201ENST00000624282 2464 ntBASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 CROT-203ENST00000419147 2959 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 DDC-213ENST00000617822 1809 ntTSL 3 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
LINC00242Q5T6M2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms