Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 AHCYP2-201ENST00000430630 1300 ntBASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 KRT8P4-201ENST00000509735 1454 ntBASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 AC005034.1-201ENST00000426657 489 ntBASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 AL035252.4-201ENST00000624174 288 ntBASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CBWD3Q5JTY5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 AC136759.1-202ENST00000530858 2194 ntBASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 CHMP1AP1-201ENST00000445563 662 ntBASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 CTBP2P5-201ENST00000454986 1264 ntBASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 CICP16-201ENST00000502609 2813 ntBASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 KRT8P28-201ENST00000433288 1390 ntBASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.97■□□□□ 0.15
CBWD3Q5JTY5 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBWD3Q5JTY5 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.96■□□□□ 0.15
CBWD3Q5JTY5 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBWD3Q5JTY5 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.96■□□□□ 0.15
CBWD3Q5JTY5 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CBWD3Q5JTY5 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.96■□□□□ 0.15
CBWD3Q5JTY5 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CBWD3Q5JTY5 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBWD3Q5JTY5 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBWD3Q5JTY5 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms