Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CERKLQ49MI3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CERKLQ49MI3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CERKLQ49MI3 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.22■□□□□ 0.35
CERKLQ49MI3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CERKLQ49MI3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CERKLQ49MI3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CERKLQ49MI3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CERKLQ49MI3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CERKLQ49MI3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CERKLQ49MI3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.22■□□□□ 0.35
CERKLQ49MI3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CERKLQ49MI3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CERKLQ49MI3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CERKLQ49MI3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CERKLQ49MI3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.22■□□□□ 0.35
CERKLQ49MI3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.22■□□□□ 0.35
CERKLQ49MI3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CERKLQ49MI3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CERKLQ49MI3 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.21■□□□□ 0.35
CERKLQ49MI3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CERKLQ49MI3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CERKLQ49MI3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CERKLQ49MI3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CERKLQ49MI3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.21■□□□□ 0.35
CERKLQ49MI3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.21■□□□□ 0.35
CERKLQ49MI3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.21■□□□□ 0.35
CERKLQ49MI3 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.21■□□□□ 0.35
CERKLQ49MI3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.21■□□□□ 0.35
CERKLQ49MI3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 TCAF2P1-201ENST00000291129 2421 ntBASIC17.21■□□□□ 0.35
CERKLQ49MI3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.21■□□□□ 0.35
CERKLQ49MI3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 AC092384.3-202ENST00000564646 2873 ntBASIC17.21■□□□□ 0.35
CERKLQ49MI3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CERKLQ49MI3 AC015688.4-201ENST00000580780 1647 ntBASIC17.21■□□□□ 0.35
CERKLQ49MI3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CERKLQ49MI3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CERKLQ49MI3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CERKLQ49MI3 TBC1D3J-201ENST00000620719 1426 ntBASIC17.21■□□□□ 0.34
CERKLQ49MI3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CERKLQ49MI3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CERKLQ49MI3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 AJ011931.1-201ENST00000618749 2492 ntBASIC17.2■□□□□ 0.34
CERKLQ49MI3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 AC003686.1-201ENST00000550956 1034 ntBASIC17.2■□□□□ 0.34
CERKLQ49MI3 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 AHCYP4-201ENST00000419201 1315 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms