Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 AL079307.3-201ENST00000556114 283 ntBASIC14.13□□□□□ -0.15
CHRNB3Q05901 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 AC025048.3-201ENST00000590609 569 ntBASIC14.13□□□□□ -0.15
CHRNB3Q05901 AC005498.2-205ENST00000593218 784 ntBASIC14.13□□□□□ -0.15
CHRNB3Q05901 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 AC138649.4-201ENST00000612222 287 ntBASIC14.13□□□□□ -0.15
CHRNB3Q05901 AC005702.4-201ENST00000618393 416 ntBASIC14.13□□□□□ -0.15
CHRNB3Q05901 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRNB3Q05901 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CHRNB3Q05901 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 TCAM1P-207ENST00000485295 1537 ntBASIC14.12□□□□□ -0.15
CHRNB3Q05901 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 BCRP1-201ENST00000444246 691 ntBASIC14.12□□□□□ -0.15
CHRNB3Q05901 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 TMEM198B-204ENST00000484016 896 ntBASIC14.12□□□□□ -0.15
CHRNB3Q05901 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 AJ011932.1-201ENST00000621707 465 ntBASIC14.12□□□□□ -0.15
CHRNB3Q05901 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.12□□□□□ -0.15
CHRNB3Q05901 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRNB3Q05901 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.11□□□□□ -0.15
CHRNB3Q05901 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRNB3Q05901 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.11□□□□□ -0.15
CHRNB3Q05901 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms