Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 AL512638.1-201ENST00000457493 794 ntBASIC11.46□□□□□ -0.57
HIST1H1AQ02539 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 DUX4L27-201ENST00000554796 1261 ntBASIC11.46□□□□□ -0.57
HIST1H1AQ02539 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 WDR88-203ENST00000592765 651 ntTSL 5 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.46□□□□□ -0.57
HIST1H1AQ02539 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H1AQ02539 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 AC007787.1-201ENST00000588095 1583 ntBASIC11.45□□□□□ -0.58
HIST1H1AQ02539 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 LBH-203ENST00000404397 543 ntTSL 4 BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 AC114501.2-201ENST00000439631 535 ntBASIC11.45□□□□□ -0.58
HIST1H1AQ02539 MEIS3P1-201ENST00000495167 958 ntBASIC11.45□□□□□ -0.58
HIST1H1AQ02539 AC004066.1-201ENST00000502488 802 ntBASIC11.45□□□□□ -0.58
HIST1H1AQ02539 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.45□□□□□ -0.58
HIST1H1AQ02539 ZNF890P-202ENST00000530367 1156 ntBASIC11.45□□□□□ -0.58
HIST1H1AQ02539 AC135586.1-201ENST00000539323 574 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms