Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKL1Q00532 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKL1Q00532 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKL1Q00532 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL1Q00532 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKL1Q00532 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
CDKL1Q00532 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKL1Q00532 AC003102.2-201ENST00000589195 1469 ntBASIC14.63□□□□□ -0.07
CDKL1Q00532 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
CDKL1Q00532 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDKL1Q00532 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CDKL1Q00532 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
CDKL1Q00532 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CDKL1Q00532 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.63□□□□□ -0.07
CDKL1Q00532 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.63□□□□□ -0.07
CDKL1Q00532 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDKL1Q00532 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.63□□□□□ -0.07
CDKL1Q00532 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKL1Q00532 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.63□□□□□ -0.07
CDKL1Q00532 PTP4A1P2-201ENST00000546033 454 ntBASIC14.63□□□□□ -0.07
CDKL1Q00532 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CDKL1Q00532 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKL1Q00532 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 AL356585.2-201ENST00000625078 2396 ntBASIC14.63□□□□□ -0.07
CDKL1Q00532 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 AL354702.1-201ENST00000442006 1960 ntBASIC14.63□□□□□ -0.07
CDKL1Q00532 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKL1Q00532 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKL1Q00532 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.63□□□□□ -0.07
CDKL1Q00532 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKL1Q00532 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
CDKL1Q00532 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL1Q00532 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CDKL1Q00532 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.63□□□□□ -0.07
CDKL1Q00532 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKL1Q00532 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.62□□□□□ -0.07
CDKL1Q00532 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKL1Q00532 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDKL1Q00532 TCAF1P1-201ENST00000414990 2232 ntBASIC14.62□□□□□ -0.07
CDKL1Q00532 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.62□□□□□ -0.07
CDKL1Q00532 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDKL1Q00532 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKL1Q00532 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKL1Q00532 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
CDKL1Q00532 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKL1Q00532 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CDKL1Q00532 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDKL1Q00532 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDKL1Q00532 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 AP006294.1-201ENST00000415407 339 ntBASIC14.62□□□□□ -0.07
CDKL1Q00532 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 HMGN1P19-201ENST00000436976 333 ntBASIC14.62□□□□□ -0.07
CDKL1Q00532 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.62□□□□□ -0.07
CDKL1Q00532 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDKL1Q00532 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.62□□□□□ -0.07
CDKL1Q00532 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
CDKL1Q00532 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKL1Q00532 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 MIR5189-201ENST00000577370 114 ntBASIC14.62□□□□□ -0.07
CDKL1Q00532 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.62□□□□□ -0.07
CDKL1Q00532 AC015802.1-201ENST00000588104 1449 ntBASIC14.62□□□□□ -0.07
CDKL1Q00532 AC092364.2-202ENST00000597012 1073 ntBASIC14.62□□□□□ -0.07
CDKL1Q00532 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 RPSAP52-203ENST00000622976 1023 ntBASIC14.62□□□□□ -0.07
CDKL1Q00532 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDKL1Q00532 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms