Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
CDK3Q00526 AC009093.10-201ENST00000641956 1442 ntBASIC14.52□□□□□ -0.08
CDK3Q00526 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDK3Q00526 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDK3Q00526 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDK3Q00526 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
CDK3Q00526 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.52□□□□□ -0.08
CDK3Q00526 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDK3Q00526 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDK3Q00526 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CDK3Q00526 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CDK3Q00526 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDK3Q00526 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDK3Q00526 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CDK3Q00526 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDK3Q00526 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.52□□□□□ -0.09
CDK3Q00526 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.52□□□□□ -0.09
CDK3Q00526 BCYRN1-201ENST00000418539 200 ntBASIC14.52□□□□□ -0.09
CDK3Q00526 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.52□□□□□ -0.09
CDK3Q00526 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.52□□□□□ -0.09
CDK3Q00526 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.52□□□□□ -0.09
CDK3Q00526 SCARNA21-201ENST00000517026 139 ntBASIC14.52□□□□□ -0.09
CDK3Q00526 AC022217.1-201ENST00000521069 738 ntBASIC14.52□□□□□ -0.09
CDK3Q00526 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.52□□□□□ -0.09
CDK3Q00526 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.52□□□□□ -0.09
CDK3Q00526 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.52□□□□□ -0.09
CDK3Q00526 AL160314.3-201ENST00000556041 767 ntBASIC14.52□□□□□ -0.09
CDK3Q00526 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.52□□□□□ -0.09
CDK3Q00526 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.52□□□□□ -0.09
CDK3Q00526 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CDK3Q00526 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDK3Q00526 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDK3Q00526 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.52□□□□□ -0.09
CDK3Q00526 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.52□□□□□ -0.09
CDK3Q00526 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDK3Q00526 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.52□□□□□ -0.09
CDK3Q00526 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.52□□□□□ -0.09
CDK3Q00526 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDK3Q00526 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDK3Q00526 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
CDK3Q00526 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDK3Q00526 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDK3Q00526 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.52□□□□□ -0.09
CDK3Q00526 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.52□□□□□ -0.09
CDK3Q00526 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.52□□□□□ -0.09
CDK3Q00526 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDK3Q00526 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDK3Q00526 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDK3Q00526 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.51□□□□□ -0.09
CDK3Q00526 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.51□□□□□ -0.09
CDK3Q00526 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.51□□□□□ -0.09
CDK3Q00526 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 FAM90A7P-201ENST00000382628 1395 ntBASIC14.51□□□□□ -0.09
CDK3Q00526 FAM90A23P-201ENST00000400136 1395 ntBASIC14.51□□□□□ -0.09
CDK3Q00526 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.51□□□□□ -0.09
CDK3Q00526 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.51□□□□□ -0.09
CDK3Q00526 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.51□□□□□ -0.09
CDK3Q00526 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.51□□□□□ -0.09
CDK3Q00526 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.51□□□□□ -0.09
CDK3Q00526 AC006122.1-201ENST00000493323 440 ntBASIC14.51□□□□□ -0.09
CDK3Q00526 MARK2P5-201ENST00000507649 634 ntBASIC14.51□□□□□ -0.09
CDK3Q00526 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.51□□□□□ -0.09
CDK3Q00526 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.51□□□□□ -0.09
CDK3Q00526 SNORD3B-2-202ENST00000571722 791 ntBASIC14.51□□□□□ -0.09
CDK3Q00526 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.51□□□□□ -0.09
CDK3Q00526 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 KHSRPP1-201ENST00000427983 1768 ntBASIC14.51□□□□□ -0.09
CDK3Q00526 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.51□□□□□ -0.09
CDK3Q00526 AC136759.1-202ENST00000530858 2194 ntBASIC14.51□□□□□ -0.09
CDK3Q00526 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.51□□□□□ -0.09
CDK3Q00526 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDK3Q00526 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
CDK3Q00526 TMBIM7P-202ENST00000641474 1516 ntBASIC14.51□□□□□ -0.09
CDK3Q00526 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.5□□□□□ -0.09
CDK3Q00526 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.5□□□□□ -0.09
CDK3Q00526 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.5□□□□□ -0.09
CDK3Q00526 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 TNRC18P2-201ENST00000417666 2714 ntBASIC14.5□□□□□ -0.09
CDK3Q00526 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms