Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
IRX4P78413 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
IRX4P78413 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 CALR4P-201ENST00000431943 946 ntBASIC15.55■□□□□ 0.08
IRX4P78413 C2orf27AP3-201ENST00000434123 579 ntBASIC15.55■□□□□ 0.08
IRX4P78413 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.55■□□□□ 0.08
IRX4P78413 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.55■□□□□ 0.08
IRX4P78413 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 AC104306.2-201ENST00000451877 341 ntBASIC15.55■□□□□ 0.08
IRX4P78413 IGHJ2P-201ENST00000454480 60 ntBASIC15.55■□□□□ 0.08
IRX4P78413 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.55■□□□□ 0.08
IRX4P78413 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.55■□□□□ 0.08
IRX4P78413 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.55■□□□□ 0.08
IRX4P78413 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
IRX4P78413 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.08
IRX4P78413 AL021578.1-201ENST00000613646 709 ntBASIC15.55■□□□□ 0.08
IRX4P78413 AL354718.3-201ENST00000616414 581 ntBASIC15.55■□□□□ 0.08
IRX4P78413 CR382287.1-201ENST00000623954 586 ntBASIC15.55■□□□□ 0.08
IRX4P78413 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
IRX4P78413 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
IRX4P78413 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.55■□□□□ 0.08
IRX4P78413 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.55■□□□□ 0.08
IRX4P78413 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.55■□□□□ 0.08
IRX4P78413 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.55■□□□□ 0.08
IRX4P78413 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
IRX4P78413 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
IRX4P78413 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
IRX4P78413 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
IRX4P78413 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
IRX4P78413 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 MROH4P-201ENST00000431302 1578 ntBASIC15.54■□□□□ 0.08
IRX4P78413 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
IRX4P78413 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
IRX4P78413 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
IRX4P78413 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
IRX4P78413 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.54■□□□□ 0.08
IRX4P78413 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
IRX4P78413 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.54■□□□□ 0.08
IRX4P78413 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
IRX4P78413 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.54■□□□□ 0.08
IRX4P78413 FAM86HP-204ENST00000513466 959 ntBASIC15.54■□□□□ 0.08
IRX4P78413 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.54■□□□□ 0.08
IRX4P78413 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.54■□□□□ 0.08
IRX4P78413 AC023310.1-201ENST00000554836 735 ntBASIC15.54■□□□□ 0.08
IRX4P78413 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.54■□□□□ 0.08
IRX4P78413 AC106872.11-201ENST00000605838 421 ntBASIC15.54■□□□□ 0.08
IRX4P78413 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.54■□□□□ 0.08
IRX4P78413 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.54■□□□□ 0.08
IRX4P78413 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
IRX4P78413 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.54■□□□□ 0.08
IRX4P78413 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.54■□□□□ 0.08
IRX4P78413 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
IRX4P78413 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
IRX4P78413 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
IRX4P78413 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
IRX4P78413 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.53■□□□□ 0.08
IRX4P78413 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
IRX4P78413 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IRX4P78413 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms