Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.45□□□□□ -0.1
YBX1P67809 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.45□□□□□ -0.1
YBX1P67809 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.45□□□□□ -0.1
YBX1P67809 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.45□□□□□ -0.1
YBX1P67809 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
YBX1P67809 CICP16-201ENST00000502609 2813 ntBASIC14.45□□□□□ -0.1
YBX1P67809 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
YBX1P67809 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
YBX1P67809 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
YBX1P67809 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.44□□□□□ -0.1
YBX1P67809 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.44□□□□□ -0.1
YBX1P67809 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
YBX1P67809 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
YBX1P67809 FKBP4P6-201ENST00000457486 1332 ntBASIC14.44□□□□□ -0.1
YBX1P67809 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.44□□□□□ -0.1
YBX1P67809 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.44□□□□□ -0.1
YBX1P67809 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
YBX1P67809 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
YBX1P67809 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
YBX1P67809 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 CICP17-201ENST00000418553 2377 ntBASIC14.44□□□□□ -0.1
YBX1P67809 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
YBX1P67809 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.44□□□□□ -0.1
YBX1P67809 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.44□□□□□ -0.1
YBX1P67809 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.44□□□□□ -0.1
YBX1P67809 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.44□□□□□ -0.1
YBX1P67809 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.44□□□□□ -0.1
YBX1P67809 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.44□□□□□ -0.1
YBX1P67809 HLA-V-201ENST00000429037 534 ntBASIC14.44□□□□□ -0.1
YBX1P67809 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
YBX1P67809 CSF2RBP1-201ENST00000447905 391 ntBASIC14.44□□□□□ -0.1
YBX1P67809 BNIP3P42-201ENST00000454982 569 ntBASIC14.44□□□□□ -0.1
YBX1P67809 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.44□□□□□ -0.1
YBX1P67809 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.44□□□□□ -0.1
YBX1P67809 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.44□□□□□ -0.1
YBX1P67809 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.44□□□□□ -0.1
YBX1P67809 AC106820.3-201ENST00000561653 397 ntBASIC14.44□□□□□ -0.1
YBX1P67809 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.44□□□□□ -0.1
YBX1P67809 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.44□□□□□ -0.1
YBX1P67809 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.44□□□□□ -0.1
YBX1P67809 BNIP3P29-201ENST00000598302 571 ntBASIC14.44□□□□□ -0.1
YBX1P67809 AC011447.5-201ENST00000616168 564 ntBASIC14.44□□□□□ -0.1
YBX1P67809 RHOXF1P1-202ENST00000635473 501 ntBASIC14.44□□□□□ -0.1
YBX1P67809 AL603764.1-201ENST00000636452 321 ntBASIC14.44□□□□□ -0.1
YBX1P67809 COX11-210ENST00000639671 696 ntBASIC14.44□□□□□ -0.1
YBX1P67809 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.44□□□□□ -0.1
YBX1P67809 AC011474.4-201ENST00000623523 2076 ntBASIC14.44□□□□□ -0.1
YBX1P67809 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.44□□□□□ -0.1
YBX1P67809 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
YBX1P67809 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.44□□□□□ -0.1
YBX1P67809 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
YBX1P67809 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.44□□□□□ -0.1
YBX1P67809 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
YBX1P67809 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.44□□□□□ -0.1
YBX1P67809 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.44□□□□□ -0.1
YBX1P67809 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
YBX1P67809 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
YBX1P67809 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.44□□□□□ -0.1
YBX1P67809 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
YBX1P67809 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
YBX1P67809 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 AL138725.1-201ENST00000407347 1314 ntBASIC14.43□□□□□ -0.1
YBX1P67809 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
YBX1P67809 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 BEND3P1-201ENST00000421591 1944 ntBASIC14.43□□□□□ -0.1
YBX1P67809 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.43□□□□□ -0.1
YBX1P67809 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.43□□□□□ -0.1
YBX1P67809 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms