Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PER3P56645 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PER3P56645 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.86□□□□□ -0.19
PER3P56645 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PER3P56645 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PER3P56645 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.85□□□□□ -0.19
PER3P56645 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PER3P56645 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
PER3P56645 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PER3P56645 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PER3P56645 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.85□□□□□ -0.19
PER3P56645 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.85□□□□□ -0.19
PER3P56645 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
PER3P56645 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.85□□□□□ -0.19
PER3P56645 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.85□□□□□ -0.19
PER3P56645 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.85□□□□□ -0.19
PER3P56645 FAM197Y7-201ENST00000432892 766 ntBASIC13.85□□□□□ -0.19
PER3P56645 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.85□□□□□ -0.19
PER3P56645 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
PER3P56645 AC078819.1-201ENST00000547454 765 ntBASIC13.85□□□□□ -0.19
PER3P56645 AC012085.1-201ENST00000548270 765 ntBASIC13.85□□□□□ -0.19
PER3P56645 ACTG1P17-201ENST00000558391 1119 ntBASIC13.85□□□□□ -0.19
PER3P56645 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.85□□□□□ -0.19
PER3P56645 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.85□□□□□ -0.19
PER3P56645 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
PER3P56645 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.85□□□□□ -0.19
PER3P56645 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.85□□□□□ -0.19
PER3P56645 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PER3P56645 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.85□□□□□ -0.19
PER3P56645 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PER3P56645 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.85□□□□□ -0.19
PER3P56645 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PER3P56645 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PER3P56645 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.85□□□□□ -0.19
PER3P56645 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PER3P56645 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PER3P56645 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PER3P56645 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.84□□□□□ -0.19
PER3P56645 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PER3P56645 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PER3P56645 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.84□□□□□ -0.19
PER3P56645 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
PER3P56645 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PER3P56645 CD8B2-202ENST00000417670 633 ntBASIC13.84□□□□□ -0.19
PER3P56645 MPRIPP1-201ENST00000452433 1089 ntBASIC13.84□□□□□ -0.19
PER3P56645 BX284668.4-201ENST00000453917 508 ntBASIC13.84□□□□□ -0.19
PER3P56645 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.84□□□□□ -0.19
PER3P56645 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.84□□□□□ -0.19
PER3P56645 RNA5SP486-201ENST00000515961 83 ntBASIC13.84□□□□□ -0.19
PER3P56645 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.84□□□□□ -0.19
PER3P56645 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.84□□□□□ -0.19
PER3P56645 MIR4313-201ENST00000580760 101 ntBASIC13.84□□□□□ -0.19
PER3P56645 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.84□□□□□ -0.19
PER3P56645 AC107373.2-201ENST00000607735 490 ntBASIC13.84□□□□□ -0.19
PER3P56645 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PER3P56645 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.84□□□□□ -0.19
PER3P56645 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.84□□□□□ -0.19
PER3P56645 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PER3P56645 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.84□□□□□ -0.19
PER3P56645 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.84□□□□□ -0.19
PER3P56645 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.84□□□□□ -0.19
PER3P56645 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PER3P56645 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.84□□□□□ -0.19
PER3P56645 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PER3P56645 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PER3P56645 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PER3P56645 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PER3P56645 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PER3P56645 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PER3P56645 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.84□□□□□ -0.19
PER3P56645 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.84□□□□□ -0.19
PER3P56645 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.84□□□□□ -0.19
PER3P56645 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.84□□□□□ -0.19
PER3P56645 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PER3P56645 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PER3P56645 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PER3P56645 BEND3P1-201ENST00000421591 1944 ntBASIC13.84□□□□□ -0.19
PER3P56645 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.84□□□□□ -0.19
PER3P56645 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PER3P56645 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.84□□□□□ -0.19
PER3P56645 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms