Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH13P55290 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 AC005252.2-201ENST00000624630 1141 ntBASIC14.56□□□□□ -0.08
CDH13P55290 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDH13P55290 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDH13P55290 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CDH13P55290 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDH13P55290 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH13P55290 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 AC007541.1-201ENST00000570282 1469 ntBASIC14.56□□□□□ -0.08
CDH13P55290 AC003102.2-201ENST00000589195 1469 ntBASIC14.56□□□□□ -0.08
CDH13P55290 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH13P55290 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH13P55290 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH13P55290 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH13P55290 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CDH13P55290 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH13P55290 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH13P55290 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH13P55290 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CDH13P55290 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH13P55290 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CDH13P55290 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CDH13P55290 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 C8orf49-201ENST00000525043 1968 ntBASIC14.55□□□□□ -0.08
CDH13P55290 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CDH13P55290 CICP16-201ENST00000502609 2813 ntBASIC14.55□□□□□ -0.08
CDH13P55290 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
CDH13P55290 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CDH13P55290 PMS2P2-201ENST00000425039 1128 ntBASIC14.55□□□□□ -0.08
CDH13P55290 DFFBP1-201ENST00000433250 979 ntBASIC14.55□□□□□ -0.08
CDH13P55290 AC007969.1-201ENST00000433675 447 ntBASIC14.55□□□□□ -0.08
CDH13P55290 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 AC092183.1-201ENST00000469884 875 ntBASIC14.55□□□□□ -0.08
CDH13P55290 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH13P55290 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CDH13P55290 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH13P55290 AC138761.1-201ENST00000584393 385 ntBASIC14.55□□□□□ -0.08
CDH13P55290 AC133539.2-201ENST00000604757 467 ntBASIC14.55□□□□□ -0.08
CDH13P55290 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH13P55290 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 AC009118.2-201ENST00000613275 655 ntBASIC14.55□□□□□ -0.08
CDH13P55290 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.55□□□□□ -0.08
CDH13P55290 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH13P55290 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CDH13P55290 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.55□□□□□ -0.08
CDH13P55290 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
CDH13P55290 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH13P55290 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH13P55290 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH13P55290 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH13P55290 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH13P55290 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH13P55290 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CDH13P55290 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDH13P55290 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDH13P55290 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDH13P55290 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH13P55290 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
CDH13P55290 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH13P55290 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms