Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 FKBP4P6-201ENST00000457486 1332 ntBASIC13.24□□□□□ -0.29
CSNK1A1P48729 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 FTH1P14-201ENST00000482930 551 ntBASIC13.24□□□□□ -0.29
CSNK1A1P48729 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 AC022447.6-201ENST00000515522 438 ntBASIC13.24□□□□□ -0.29
CSNK1A1P48729 RNA5SP486-201ENST00000515961 83 ntBASIC13.24□□□□□ -0.29
CSNK1A1P48729 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 CR383656.12-201ENST00000549567 513 ntBASIC13.24□□□□□ -0.29
CSNK1A1P48729 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 AC138696.2-201ENST00000607376 223 ntBASIC13.24□□□□□ -0.29
CSNK1A1P48729 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 AC011840.2-201ENST00000563063 1520 ntBASIC13.23□□□□□ -0.29
CSNK1A1P48729 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 AC092053.3-201ENST00000641308 4975 ntBASIC13.23□□□□□ -0.29
CSNK1A1P48729 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 AC092135.3-201ENST00000624151 1846 ntBASIC13.23□□□□□ -0.29
CSNK1A1P48729 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 AL590640.2-201ENST00000457038 527 ntBASIC13.23□□□□□ -0.29
CSNK1A1P48729 AC007551.1-201ENST00000457394 519 ntBASIC13.23□□□□□ -0.29
CSNK1A1P48729 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 AL354702.1-201ENST00000442006 1960 ntBASIC13.23□□□□□ -0.29
CSNK1A1P48729 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.23□□□□□ -0.29
CSNK1A1P48729 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1A1P48729 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms