Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.98□□□□□ -0.17
GABRA4P48169 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.98□□□□□ -0.17
GABRA4P48169 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.98□□□□□ -0.17
GABRA4P48169 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.98□□□□□ -0.17
GABRA4P48169 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
GABRA4P48169 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.98□□□□□ -0.17
GABRA4P48169 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.98□□□□□ -0.17
GABRA4P48169 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.98□□□□□ -0.17
GABRA4P48169 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.98□□□□□ -0.17
GABRA4P48169 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.98□□□□□ -0.17
GABRA4P48169 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GABRA4P48169 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
GABRA4P48169 AL136295.7-201ENST00000619226 1200 ntBASIC13.98□□□□□ -0.17
GABRA4P48169 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
GABRA4P48169 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.98□□□□□ -0.17
GABRA4P48169 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
GABRA4P48169 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.98□□□□□ -0.17
GABRA4P48169 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GABRA4P48169 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.98□□□□□ -0.17
GABRA4P48169 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
GABRA4P48169 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.97□□□□□ -0.17
GABRA4P48169 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.97□□□□□ -0.17
GABRA4P48169 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
GABRA4P48169 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
GABRA4P48169 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
GABRA4P48169 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
GABRA4P48169 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
GABRA4P48169 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.97□□□□□ -0.17
GABRA4P48169 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.97□□□□□ -0.17
GABRA4P48169 AL008707.1-201ENST00000422498 534 ntBASIC13.97□□□□□ -0.17
GABRA4P48169 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.97□□□□□ -0.17
GABRA4P48169 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.97□□□□□ -0.17
GABRA4P48169 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.97□□□□□ -0.17
GABRA4P48169 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.97□□□□□ -0.17
GABRA4P48169 RBM8B-201ENST00000555532 525 ntBASIC13.97□□□□□ -0.17
GABRA4P48169 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.97□□□□□ -0.17
GABRA4P48169 MIR3619-201ENST00000579667 83 ntBASIC13.97□□□□□ -0.17
GABRA4P48169 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.97□□□□□ -0.17
GABRA4P48169 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
GABRA4P48169 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.97□□□□□ -0.17
GABRA4P48169 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
GABRA4P48169 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.97□□□□□ -0.17
GABRA4P48169 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.97□□□□□ -0.17
GABRA4P48169 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.97□□□□□ -0.17
GABRA4P48169 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.97□□□□□ -0.17
GABRA4P48169 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.97□□□□□ -0.17
GABRA4P48169 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.97□□□□□ -0.17
GABRA4P48169 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
GABRA4P48169 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
GABRA4P48169 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.97□□□□□ -0.17
GABRA4P48169 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.97□□□□□ -0.17
GABRA4P48169 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GABRA4P48169 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
GABRA4P48169 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
GABRA4P48169 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 MTHFR-210ENST00000641407 2387 ntBASIC13.96□□□□□ -0.17
GABRA4P48169 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.96□□□□□ -0.17
GABRA4P48169 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms