Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
CNGA1P29973 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.86■□□□□ 0.29
CNGA1P29973 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.86■□□□□ 0.29
CNGA1P29973 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.86■□□□□ 0.29
CNGA1P29973 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.86■□□□□ 0.29
CNGA1P29973 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA1P29973 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA1P29973 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA1P29973 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CNGA1P29973 AC244394.1-201ENST00000435000 1665 ntBASIC16.85■□□□□ 0.29
CNGA1P29973 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA1P29973 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.85■□□□□ 0.29
CNGA1P29973 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CNGA1P29973 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA1P29973 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA1P29973 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA1P29973 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA1P29973 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA1P29973 AC010141.1-201ENST00000411585 623 ntBASIC16.85■□□□□ 0.29
CNGA1P29973 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.85■□□□□ 0.29
CNGA1P29973 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA1P29973 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.85■□□□□ 0.29
CNGA1P29973 VDAC1P1-201ENST00000439229 848 ntBASIC16.85■□□□□ 0.29
CNGA1P29973 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.85■□□□□ 0.29
CNGA1P29973 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA1P29973 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.85■□□□□ 0.29
CNGA1P29973 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA1P29973 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
CNGA1P29973 AC087045.2-201ENST00000606279 1003 ntBASIC16.85■□□□□ 0.29
CNGA1P29973 AC138696.2-201ENST00000607376 223 ntBASIC16.85■□□□□ 0.29
CNGA1P29973 AC092171.5-201ENST00000608012 942 ntBASIC16.85■□□□□ 0.29
CNGA1P29973 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CNGA1P29973 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.85■□□□□ 0.29
CNGA1P29973 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.85■□□□□ 0.29
CNGA1P29973 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA1P29973 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA1P29973 AL359258.3-201ENST00000622910 2331 ntBASIC16.85■□□□□ 0.29
CNGA1P29973 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.85■□□□□ 0.29
CNGA1P29973 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA1P29973 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CNGA1P29973 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CNGA1P29973 MIR600HG-201ENST00000449175 5984 ntBASIC16.84■□□□□ 0.29
CNGA1P29973 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CNGA1P29973 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.84■□□□□ 0.29
CNGA1P29973 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CNGA1P29973 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CNGA1P29973 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
CNGA1P29973 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
CNGA1P29973 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.84■□□□□ 0.29
CNGA1P29973 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CNGA1P29973 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.84■□□□□ 0.29
CNGA1P29973 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CNGA1P29973 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.84■□□□□ 0.29
CNGA1P29973 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.84■□□□□ 0.29
CNGA1P29973 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.84■□□□□ 0.29
CNGA1P29973 SCARNA21-201ENST00000517026 139 ntBASIC16.84■□□□□ 0.29
CNGA1P29973 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CNGA1P29973 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CNGA1P29973 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 AC005962.1-201ENST00000584100 773 ntBASIC16.84■□□□□ 0.29
CNGA1P29973 AC103810.10-201ENST00000606504 343 ntBASIC16.84■□□□□ 0.29
CNGA1P29973 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.84■□□□□ 0.29
CNGA1P29973 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CNGA1P29973 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.84■□□□□ 0.29
CNGA1P29973 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.84■□□□□ 0.29
CNGA1P29973 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.84■□□□□ 0.29
CNGA1P29973 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CNGA1P29973 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CNGA1P29973 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA1P29973 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CNGA1P29973 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.84■□□□□ 0.29
CNGA1P29973 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms