Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.76□□□□□ -0.37
CD40P25942 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.76□□□□□ -0.37
CD40P25942 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.76□□□□□ -0.37
CD40P25942 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.76□□□□□ -0.37
CD40P25942 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.76□□□□□ -0.37
CD40P25942 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 AC011742.3-201ENST00000439053 820 ntBASIC12.76□□□□□ -0.37
CD40P25942 KLF2P1-201ENST00000447438 1042 ntBASIC12.76□□□□□ -0.37
CD40P25942 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.76□□□□□ -0.37
CD40P25942 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.76□□□□□ -0.37
CD40P25942 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.76□□□□□ -0.37
CD40P25942 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CD40P25942 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.76□□□□□ -0.37
CD40P25942 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.76□□□□□ -0.37
CD40P25942 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CD40P25942 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.76□□□□□ -0.37
CD40P25942 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.76□□□□□ -0.37
CD40P25942 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.76□□□□□ -0.37
CD40P25942 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.76□□□□□ -0.37
CD40P25942 AC008805.1-201ENST00000590892 364 ntBASIC12.76□□□□□ -0.37
CD40P25942 AC090164.2-201ENST00000611487 516 ntBASIC12.76□□□□□ -0.37
CD40P25942 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CD40P25942 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.76□□□□□ -0.37
CD40P25942 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.76□□□□□ -0.37
CD40P25942 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CD40P25942 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.76□□□□□ -0.37
CD40P25942 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CD40P25942 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.76□□□□□ -0.37
CD40P25942 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.76□□□□□ -0.37
CD40P25942 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.76□□□□□ -0.37
CD40P25942 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.76□□□□□ -0.37
CD40P25942 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CD40P25942 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CD40P25942 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.75□□□□□ -0.37
CD40P25942 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.75□□□□□ -0.37
CD40P25942 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.75□□□□□ -0.37
CD40P25942 SLC25A24P2-201ENST00000415059 510 ntBASIC12.75□□□□□ -0.37
CD40P25942 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.75□□□□□ -0.37
CD40P25942 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.75□□□□□ -0.37
CD40P25942 AC022217.1-201ENST00000521069 738 ntBASIC12.75□□□□□ -0.37
CD40P25942 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.75□□□□□ -0.37
CD40P25942 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.75□□□□□ -0.37
CD40P25942 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.75□□□□□ -0.37
CD40P25942 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CD40P25942 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.75□□□□□ -0.37
CD40P25942 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.75□□□□□ -0.37
CD40P25942 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.75□□□□□ -0.37
CD40P25942 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.75□□□□□ -0.37
CD40P25942 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 AP000346.4-201ENST00000614827 381 ntBASIC12.75□□□□□ -0.37
CD40P25942 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.75□□□□□ -0.37
CD40P25942 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.75□□□□□ -0.37
CD40P25942 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.75□□□□□ -0.37
CD40P25942 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.75□□□□□ -0.37
CD40P25942 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.75□□□□□ -0.37
CD40P25942 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD40P25942 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms