Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH3P22223 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH3P22223 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.64□□□□□ -0.07
CDH3P22223 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH3P22223 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDH3P22223 C18orf15-201ENST00000623680 2534 ntBASIC14.64□□□□□ -0.07
CDH3P22223 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDH3P22223 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDH3P22223 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDH3P22223 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH3P22223 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.64□□□□□ -0.07
CDH3P22223 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.64□□□□□ -0.07
CDH3P22223 YBX1P6-201ENST00000442962 1002 ntBASIC14.64□□□□□ -0.07
CDH3P22223 AL590640.2-201ENST00000457038 527 ntBASIC14.64□□□□□ -0.07
CDH3P22223 RNA5SP486-201ENST00000515961 83 ntBASIC14.64□□□□□ -0.07
CDH3P22223 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.64□□□□□ -0.07
CDH3P22223 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.64□□□□□ -0.07
CDH3P22223 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.64□□□□□ -0.07
CDH3P22223 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH3P22223 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.64□□□□□ -0.07
CDH3P22223 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.64□□□□□ -0.07
CDH3P22223 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH3P22223 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH3P22223 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CDH3P22223 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH3P22223 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 AC013726.1-201ENST00000563747 2285 ntBASIC14.64□□□□□ -0.07
CDH3P22223 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDH3P22223 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDH3P22223 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH3P22223 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH3P22223 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH3P22223 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
CDH3P22223 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 AL356585.2-201ENST00000625078 2396 ntBASIC14.63□□□□□ -0.07
CDH3P22223 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CDH3P22223 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH3P22223 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDH3P22223 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH3P22223 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH3P22223 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CDH3P22223 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH3P22223 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH3P22223 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH3P22223 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH3P22223 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
CDH3P22223 AC026954.1-201ENST00000429771 1293 ntBASIC14.63□□□□□ -0.07
CDH3P22223 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH3P22223 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CDH3P22223 AC023310.1-201ENST00000554836 735 ntBASIC14.63□□□□□ -0.07
CDH3P22223 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.63□□□□□ -0.07
CDH3P22223 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH3P22223 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH3P22223 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CDH3P22223 RN7SL48P-201ENST00000579283 293 ntBASIC14.63□□□□□ -0.07
CDH3P22223 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.63□□□□□ -0.07
CDH3P22223 ECM1P1-201ENST00000604092 1279 ntBASIC14.63□□□□□ -0.07
CDH3P22223 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.63□□□□□ -0.07
CDH3P22223 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH3P22223 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH3P22223 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH3P22223 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDH3P22223 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms