Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA4P13612 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA4P13612 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA4P13612 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA4P13612 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.29■□□□□ 0.2
ITGA4P13612 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA4P13612 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.29■□□□□ 0.2
ITGA4P13612 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA4P13612 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA4P13612 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA4P13612 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.28■□□□□ 0.2
ITGA4P13612 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ITGA4P13612 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.28■□□□□ 0.2
ITGA4P13612 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.28■□□□□ 0.2
ITGA4P13612 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
ITGA4P13612 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.28■□□□□ 0.2
ITGA4P13612 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ITGA4P13612 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ITGA4P13612 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ITGA4P13612 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ITGA4P13612 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.28■□□□□ 0.2
ITGA4P13612 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 AL354877.1-201ENST00000424412 413 ntBASIC16.28■□□□□ 0.2
ITGA4P13612 AKR7A2P1-201ENST00000460134 915 ntBASIC16.28■□□□□ 0.2
ITGA4P13612 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.28■□□□□ 0.2
ITGA4P13612 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.28■□□□□ 0.2
ITGA4P13612 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.28■□□□□ 0.2
ITGA4P13612 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.28■□□□□ 0.2
ITGA4P13612 AC020914.3-201ENST00000594712 304 ntBASIC16.28■□□□□ 0.2
ITGA4P13612 AC138696.2-201ENST00000607376 223 ntBASIC16.28■□□□□ 0.2
ITGA4P13612 AC002472.3-201ENST00000640124 621 ntBASIC16.28■□□□□ 0.2
ITGA4P13612 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.28■□□□□ 0.2
ITGA4P13612 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ITGA4P13612 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ITGA4P13612 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA4P13612 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.27■□□□□ 0.2
ITGA4P13612 WASH3P-207ENST00000560956 1394 ntBASIC16.27■□□□□ 0.2
ITGA4P13612 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA4P13612 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA4P13612 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA4P13612 INE2-201ENST00000630399 1874 ntBASIC16.27■□□□□ 0.2
ITGA4P13612 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
ITGA4P13612 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ITGA4P13612 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
ITGA4P13612 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA4P13612 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.27■□□□□ 0.2
ITGA4P13612 REXO1L2P-201ENST00000425429 2069 ntBASIC16.27■□□□□ 0.2
ITGA4P13612 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA4P13612 CALR4P-201ENST00000431943 946 ntBASIC16.27■□□□□ 0.2
ITGA4P13612 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.27■□□□□ 0.2
ITGA4P13612 SCARNA20.5-201ENST00000516991 142 ntBASIC16.27■□□□□ 0.2
ITGA4P13612 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA4P13612 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.27■□□□□ 0.2
ITGA4P13612 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.27■□□□□ 0.2
ITGA4P13612 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.27■□□□□ 0.2
ITGA4P13612 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.27■□□□□ 0.2
ITGA4P13612 AL136301.1-201ENST00000615830 422 ntBASIC16.27■□□□□ 0.2
ITGA4P13612 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA4P13612 AC011840.2-201ENST00000563063 1520 ntBASIC16.27■□□□□ 0.2
ITGA4P13612 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA4P13612 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.27■□□□□ 0.2
ITGA4P13612 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.27■□□□□ 0.2
ITGA4P13612 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.27■□□□□ 0.19
ITGA4P13612 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.27■□□□□ 0.19
ITGA4P13612 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ITGA4P13612 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ITGA4P13612 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
ITGA4P13612 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ITGA4P13612 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.27■□□□□ 0.19
ITGA4P13612 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
ITGA4P13612 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
ITGA4P13612 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA4P13612 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA4P13612 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
ITGA4P13612 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
ITGA4P13612 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ITGA4P13612 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA4P13612 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.26■□□□□ 0.19
ITGA4P13612 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ITGA4P13612 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.26■□□□□ 0.19
ITGA4P13612 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.26■□□□□ 0.19
ITGA4P13612 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA4P13612 LINC01230-201ENST00000625222 3017 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms