Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.82□□□□□ -0.2
PEPDP12955 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 RNU1-114P-201ENST00000365297 166 ntBASIC13.82□□□□□ -0.2
PEPDP12955 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
PEPDP12955 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PEPDP12955 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.82□□□□□ -0.2
PEPDP12955 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.82□□□□□ -0.2
PEPDP12955 AC112492.5-201ENST00000421897 457 ntBASIC13.82□□□□□ -0.2
PEPDP12955 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.82□□□□□ -0.2
PEPDP12955 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.82□□□□□ -0.2
PEPDP12955 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.82□□□□□ -0.2
PEPDP12955 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.82□□□□□ -0.2
PEPDP12955 AC017083.2-201ENST00000608069 979 ntBASIC13.82□□□□□ -0.2
PEPDP12955 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.82□□□□□ -0.2
PEPDP12955 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.82□□□□□ -0.2
PEPDP12955 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
PEPDP12955 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.82□□□□□ -0.2
PEPDP12955 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
PEPDP12955 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.82□□□□□ -0.2
PEPDP12955 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.82□□□□□ -0.2
PEPDP12955 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.82□□□□□ -0.2
PEPDP12955 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.82□□□□□ -0.2
PEPDP12955 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.82□□□□□ -0.2
PEPDP12955 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.82□□□□□ -0.2
PEPDP12955 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PEPDP12955 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
PEPDP12955 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PEPDP12955 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PEPDP12955 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.81□□□□□ -0.2
PEPDP12955 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 AL359183.1-201ENST00000623796 2132 ntBASIC13.81□□□□□ -0.2
PEPDP12955 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.81□□□□□ -0.2
PEPDP12955 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.81□□□□□ -0.2
PEPDP12955 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.81□□□□□ -0.2
PEPDP12955 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PEPDP12955 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.81□□□□□ -0.2
PEPDP12955 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.81□□□□□ -0.2
PEPDP12955 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 BCRP2-202ENST00000447763 634 ntBASIC13.81□□□□□ -0.2
PEPDP12955 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.81□□□□□ -0.2
PEPDP12955 ACA64.2-201ENST00000459014 129 ntBASIC13.81□□□□□ -0.2
PEPDP12955 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.81□□□□□ -0.2
PEPDP12955 BCRP6-201ENST00000510112 632 ntBASIC13.81□□□□□ -0.2
PEPDP12955 BCRP7-201ENST00000511549 544 ntBASIC13.81□□□□□ -0.2
PEPDP12955 IGHV3-71-201ENST00000523324 359 ntBASIC13.81□□□□□ -0.2
PEPDP12955 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.81□□□□□ -0.2
PEPDP12955 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.81□□□□□ -0.2
PEPDP12955 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.81□□□□□ -0.2
PEPDP12955 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.81□□□□□ -0.2
PEPDP12955 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.81□□□□□ -0.2
PEPDP12955 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PEPDP12955 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PEPDP12955 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.81□□□□□ -0.2
PEPDP12955 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 KRT8P35-201ENST00000483942 1338 ntBASIC13.81□□□□□ -0.2
PEPDP12955 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.81□□□□□ -0.2
PEPDP12955 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.81□□□□□ -0.2
PEPDP12955 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.81□□□□□ -0.2
PEPDP12955 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
PEPDP12955 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.81□□□□□ -0.2
PEPDP12955 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PEPDP12955 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PEPDP12955 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PEPDP12955 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PEPDP12955 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms