Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TOP1P11387 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
TOP1P11387 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.43■□□□□ 0.38
TOP1P11387 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 AC104306.2-201ENST00000451877 341 ntBASIC17.43■□□□□ 0.38
TOP1P11387 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.43■□□□□ 0.38
TOP1P11387 ALG3P1-201ENST00000508806 1114 ntBASIC17.43■□□□□ 0.38
TOP1P11387 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.43■□□□□ 0.38
TOP1P11387 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.43■□□□□ 0.38
TOP1P11387 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.43■□□□□ 0.38
TOP1P11387 AC007191.1-201ENST00000623179 2995 ntBASIC17.43■□□□□ 0.38
TOP1P11387 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.43■□□□□ 0.38
TOP1P11387 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.43■□□□□ 0.38
TOP1P11387 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
TOP1P11387 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TOP1P11387 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.43■□□□□ 0.38
TOP1P11387 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.42■□□□□ 0.38
TOP1P11387 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.42■□□□□ 0.38
TOP1P11387 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.42■□□□□ 0.38
TOP1P11387 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TOP1P11387 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TOP1P11387 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.42■□□□□ 0.38
TOP1P11387 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TOP1P11387 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 AL354877.1-201ENST00000424412 413 ntBASIC17.42■□□□□ 0.38
TOP1P11387 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.42■□□□□ 0.38
TOP1P11387 GCOM2-201ENST00000509133 1104 ntBASIC17.42■□□□□ 0.38
TOP1P11387 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TOP1P11387 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.42■□□□□ 0.38
TOP1P11387 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.42■□□□□ 0.38
TOP1P11387 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.42■□□□□ 0.38
TOP1P11387 AL118558.3-201ENST00000607414 1079 ntBASIC17.42■□□□□ 0.38
TOP1P11387 BX088702.1-201ENST00000610784 235 ntBASIC17.42■□□□□ 0.38
TOP1P11387 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.42■□□□□ 0.38
TOP1P11387 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.42■□□□□ 0.38
TOP1P11387 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.42■□□□□ 0.38
TOP1P11387 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.42■□□□□ 0.38
TOP1P11387 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TOP1P11387 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP1P11387 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
TOP1P11387 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
TOP1P11387 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TOP1P11387 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.41■□□□□ 0.38
TOP1P11387 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.41■□□□□ 0.38
TOP1P11387 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.41■□□□□ 0.38
TOP1P11387 AC010141.1-201ENST00000411585 623 ntBASIC17.41■□□□□ 0.38
TOP1P11387 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.41■□□□□ 0.38
TOP1P11387 POM121L10P-201ENST00000436994 1285 ntBASIC17.41■□□□□ 0.38
TOP1P11387 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TOP1P11387 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.41■□□□□ 0.38
TOP1P11387 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms