Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
COL5A2P05997 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL5A2P05997 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
COL5A2P05997 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL5A2P05997 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL5A2P05997 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL5A2P05997 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.93■□□□□ 0.62
COL5A2P05997 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL5A2P05997 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
COL5A2P05997 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.93■□□□□ 0.62
COL5A2P05997 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COL5A2P05997 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COL5A2P05997 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL5A2P05997 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.92■□□□□ 0.62
COL5A2P05997 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.92■□□□□ 0.62
COL5A2P05997 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC18.92■□□□□ 0.62
COL5A2P05997 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
COL5A2P05997 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL5A2P05997 KRT18P4-201ENST00000422599 1288 ntBASIC18.92■□□□□ 0.62
COL5A2P05997 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
COL5A2P05997 RPL3P5-201ENST00000441645 1232 ntBASIC18.92■□□□□ 0.62
COL5A2P05997 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC18.92■□□□□ 0.62
COL5A2P05997 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL5A2P05997 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC18.92■□□□□ 0.62
COL5A2P05997 DLK1-205ENST00000556051 469 ntTSL 2 BASIC18.92■□□□□ 0.62
COL5A2P05997 AC068831.5-201ENST00000557387 328 ntBASIC18.92■□□□□ 0.62
COL5A2P05997 CMC2-204ENST00000562713 573 ntTSL 3 BASIC18.92■□□□□ 0.62
COL5A2P05997 CMC2-209ENST00000565108 399 ntTSL 2 BASIC18.92■□□□□ 0.62
COL5A2P05997 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC18.92■□□□□ 0.62
COL5A2P05997 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL5A2P05997 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL5A2P05997 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL5A2P05997 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.92■□□□□ 0.62
COL5A2P05997 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC18.92■□□□□ 0.62
COL5A2P05997 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC18.92■□□□□ 0.62
COL5A2P05997 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.92■□□□□ 0.62
COL5A2P05997 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL5A2P05997 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
COL5A2P05997 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
COL5A2P05997 DOC2GP-204ENST00000639052 2548 ntBASIC18.92■□□□□ 0.62
COL5A2P05997 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL5A2P05997 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL5A2P05997 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL5A2P05997 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 PDXDC2P-206ENST00000534700 1315 ntBASIC18.91■□□□□ 0.62
COL5A2P05997 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
COL5A2P05997 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 UROS-201ENST00000368774 744 ntTSL 2 BASIC18.91■□□□□ 0.62
COL5A2P05997 AF274858.1-201ENST00000406288 372 ntBASIC18.91■□□□□ 0.62
COL5A2P05997 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC18.91■□□□□ 0.62
COL5A2P05997 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC18.91■□□□□ 0.62
COL5A2P05997 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC18.91■□□□□ 0.62
COL5A2P05997 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC18.91■□□□□ 0.62
COL5A2P05997 EEF1GP8-201ENST00000506566 1154 ntBASIC18.91■□□□□ 0.62
COL5A2P05997 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC18.91■□□□□ 0.62
COL5A2P05997 RN7SL556P-201ENST00000582856 298 ntBASIC18.91■□□□□ 0.62
COL5A2P05997 AC104506.1-201ENST00000609247 429 ntBASIC18.91■□□□□ 0.62
COL5A2P05997 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC18.91■□□□□ 0.62
COL5A2P05997 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.91■□□□□ 0.62
COL5A2P05997 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.91■□□□□ 0.62
COL5A2P05997 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.91■□□□□ 0.62
COL5A2P05997 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
COL5A2P05997 AC117503.4-201ENST00000623229 1418 ntBASIC18.91■□□□□ 0.62
COL5A2P05997 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
COL5A2P05997 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
COL5A2P05997 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC18.91■□□□□ 0.62
COL5A2P05997 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC18.91■□□□□ 0.62
COL5A2P05997 AL365181.1-201ENST00000564032 1828 ntBASIC18.91■□□□□ 0.62
COL5A2P05997 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.91■□□□□ 0.62
COL5A2P05997 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 ENPP7P8-202ENST00000527856 1345 ntBASIC18.91■□□□□ 0.62
COL5A2P05997 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL5A2P05997 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL5A2P05997 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC18.9■□□□□ 0.62
COL5A2P05997 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COL5A2P05997 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC18.9■□□□□ 0.62
COL5A2P05997 PRSS3P1-201ENST00000503996 742 ntBASIC18.9■□□□□ 0.62
COL5A2P05997 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC18.9■□□□□ 0.62
COL5A2P05997 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC18.9■□□□□ 0.62
COL5A2P05997 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC18.9■□□□□ 0.62
COL5A2P05997 MIR4265-201ENST00000582152 99 ntBASIC18.9■□□□□ 0.62
COL5A2P05997 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC18.9■□□□□ 0.62
COL5A2P05997 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC18.9■□□□□ 0.62
COL5A2P05997 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
COL5A2P05997 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL5A2P05997 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL5A2P05997 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms