Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.49□□□□□ -0.41
GAPDHP04406 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.49□□□□□ -0.41
GAPDHP04406 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAPDHP04406 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
GAPDHP04406 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
GAPDHP04406 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.49□□□□□ -0.41
GAPDHP04406 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.49□□□□□ -0.41
GAPDHP04406 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAPDHP04406 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAPDHP04406 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.49□□□□□ -0.41
GAPDHP04406 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAPDHP04406 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAPDHP04406 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAPDHP04406 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAPDHP04406 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAPDHP04406 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
GAPDHP04406 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.48□□□□□ -0.41
GAPDHP04406 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.48□□□□□ -0.41
GAPDHP04406 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
GAPDHP04406 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 DRD5P1-201ENST00000456605 1438 ntBASIC12.48□□□□□ -0.41
GAPDHP04406 KRT8P22-201ENST00000562317 1415 ntBASIC12.48□□□□□ -0.41
GAPDHP04406 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
GAPDHP04406 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.48□□□□□ -0.41
GAPDHP04406 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.48□□□□□ -0.41
GAPDHP04406 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
GAPDHP04406 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.48□□□□□ -0.41
GAPDHP04406 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.48□□□□□ -0.41
GAPDHP04406 AC026410.3-201ENST00000514280 936 ntBASIC12.48□□□□□ -0.41
GAPDHP04406 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.48□□□□□ -0.41
GAPDHP04406 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.48□□□□□ -0.41
GAPDHP04406 AC092364.2-202ENST00000597012 1073 ntBASIC12.48□□□□□ -0.41
GAPDHP04406 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.48□□□□□ -0.41
GAPDHP04406 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.48□□□□□ -0.41
GAPDHP04406 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.48□□□□□ -0.41
GAPDHP04406 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
GAPDHP04406 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
GAPDHP04406 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
GAPDHP04406 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
GAPDHP04406 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.48□□□□□ -0.41
GAPDHP04406 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAPDHP04406 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.48□□□□□ -0.41
GAPDHP04406 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.48□□□□□ -0.41
GAPDHP04406 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAPDHP04406 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAPDHP04406 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.47□□□□□ -0.41
GAPDHP04406 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
GAPDHP04406 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAPDHP04406 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.47□□□□□ -0.41
GAPDHP04406 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAPDHP04406 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAPDHP04406 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAPDHP04406 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAPDHP04406 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GAPDHP04406 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.47□□□□□ -0.41
GAPDHP04406 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAPDHP04406 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAPDHP04406 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.47□□□□□ -0.41
GAPDHP04406 AC104457.1-201ENST00000401024 814 ntBASIC12.47□□□□□ -0.41
GAPDHP04406 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.47□□□□□ -0.41
GAPDHP04406 AL442647.2-201ENST00000429864 857 ntBASIC12.47□□□□□ -0.41
GAPDHP04406 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.47□□□□□ -0.41
GAPDHP04406 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.47□□□□□ -0.41
GAPDHP04406 VDAC1P7-201ENST00000462417 847 ntBASIC12.47□□□□□ -0.41
GAPDHP04406 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.47□□□□□ -0.41
GAPDHP04406 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.47□□□□□ -0.41
GAPDHP04406 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.47□□□□□ -0.41
GAPDHP04406 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.47□□□□□ -0.41
GAPDHP04406 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
GAPDHP04406 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.47□□□□□ -0.41
GAPDHP04406 BRI3BPP1-201ENST00000594224 787 ntBASIC12.47□□□□□ -0.41
GAPDHP04406 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.47□□□□□ -0.41
GAPDHP04406 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms