Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND3P03897 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
MT-ND3P03897 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MT-ND3P03897 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MT-ND3P03897 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MT-ND3P03897 AL031595.1-201ENST00000623969 4709 ntBASIC15.21■□□□□ 0.02
MT-ND3P03897 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
MT-ND3P03897 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
MT-ND3P03897 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-ND3P03897 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 AC079781.5-202ENST00000641784 3743 ntBASIC15.2■□□□□ 0.02
MT-ND3P03897 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 AL157414.3-201ENST00000624276 1954 ntBASIC15.2■□□□□ 0.02
MT-ND3P03897 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-ND3P03897 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
MT-ND3P03897 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 AC131212.3-201ENST00000624087 4219 ntBASIC15.2■□□□□ 0.02
MT-ND3P03897 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
MT-ND3P03897 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
MT-ND3P03897 DGCR5-201ENST00000399539 862 ntBASIC15.2■□□□□ 0.02
MT-ND3P03897 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
MT-ND3P03897 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.2■□□□□ 0.02
MT-ND3P03897 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MT-ND3P03897 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.2■□□□□ 0.02
MT-ND3P03897 GPR53P-205ENST00000457298 1084 ntBASIC15.2■□□□□ 0.02
MT-ND3P03897 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.2■□□□□ 0.02
MT-ND3P03897 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-ND3P03897 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.2■□□□□ 0.02
MT-ND3P03897 AC092337.1-201ENST00000568699 1129 ntBASIC15.2■□□□□ 0.02
MT-ND3P03897 AC007431.3-201ENST00000623221 587 ntBASIC15.2■□□□□ 0.02
MT-ND3P03897 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.2■□□□□ 0.02
MT-ND3P03897 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.2■□□□□ 0.02
MT-ND3P03897 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MT-ND3P03897 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.2■□□□□ 0.02
MT-ND3P03897 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
MT-ND3P03897 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MT-ND3P03897 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-ND3P03897 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MT-ND3P03897 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-ND3P03897 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MT-ND3P03897 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
MT-ND3P03897 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MT-ND3P03897 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.19■□□□□ 0.02
MT-ND3P03897 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-ND3P03897 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.19■□□□□ 0.02
MT-ND3P03897 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.19■□□□□ 0.02
MT-ND3P03897 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-ND3P03897 GIMAP3P-201ENST00000495150 836 ntBASIC15.19■□□□□ 0.02
MT-ND3P03897 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.19■□□□□ 0.02
MT-ND3P03897 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.19■□□□□ 0.02
MT-ND3P03897 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.19■□□□□ 0.02
MT-ND3P03897 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MT-ND3P03897 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-ND3P03897 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.19■□□□□ 0.02
MT-ND3P03897 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-ND3P03897 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.19■□□□□ 0.02
MT-ND3P03897 AC008494.3-201ENST00000606615 944 ntBASIC15.19■□□□□ 0.02
MT-ND3P03897 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MT-ND3P03897 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MT-ND3P03897 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms