Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
POLR1AO95602 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC20.96■□□□□ 0.95
POLR1AO95602 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
POLR1AO95602 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
POLR1AO95602 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
POLR1AO95602 MIR645-201ENST00000385283 94 ntBASIC20.95■□□□□ 0.94
POLR1AO95602 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC20.95■□□□□ 0.94
POLR1AO95602 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC20.95■□□□□ 0.94
POLR1AO95602 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC20.95■□□□□ 0.94
POLR1AO95602 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC20.95■□□□□ 0.94
POLR1AO95602 HERC2P11-201ENST00000562845 725 ntBASIC20.95■□□□□ 0.94
POLR1AO95602 AC100756.2-201ENST00000569537 736 ntBASIC20.95■□□□□ 0.94
POLR1AO95602 MIR6746-201ENST00000620971 63 ntBASIC20.95■□□□□ 0.94
POLR1AO95602 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
POLR1AO95602 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
POLR1AO95602 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
POLR1AO95602 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
POLR1AO95602 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
POLR1AO95602 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
POLR1AO95602 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 MX1-218ENST00000619682 1980 ntTSL 5 BASIC20.95■□□□□ 0.94
POLR1AO95602 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC20.95■□□□□ 0.94
POLR1AO95602 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC20.95■□□□□ 0.94
POLR1AO95602 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
POLR1AO95602 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC20.95■□□□□ 0.94
POLR1AO95602 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC20.95■□□□□ 0.94
POLR1AO95602 BX088702.1-201ENST00000610784 235 ntBASIC20.95■□□□□ 0.94
POLR1AO95602 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC20.95■□□□□ 0.94
POLR1AO95602 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1AO95602 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1AO95602 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1AO95602 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1AO95602 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1AO95602 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1AO95602 PYY2-201ENST00000315776 282 ntBASIC20.94■□□□□ 0.94
POLR1AO95602 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1AO95602 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC20.94■□□□□ 0.94
POLR1AO95602 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC20.94■□□□□ 0.94
POLR1AO95602 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1AO95602 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1AO95602 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC20.94■□□□□ 0.94
POLR1AO95602 ELP5-212ENST00000574255 671 ntTSL 2 BASIC20.94■□□□□ 0.94
POLR1AO95602 AP005212.2-201ENST00000584979 510 ntBASIC20.94■□□□□ 0.94
POLR1AO95602 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC20.94■□□□□ 0.94
POLR1AO95602 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1AO95602 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
POLR1AO95602 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.94■□□□□ 0.94
POLR1AO95602 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1AO95602 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1AO95602 AL354702.1-201ENST00000442006 1960 ntBASIC20.94■□□□□ 0.94
POLR1AO95602 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1AO95602 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
POLR1AO95602 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
POLR1AO95602 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1AO95602 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1AO95602 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1AO95602 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1AO95602 KRT17P5-201ENST00000332088 839 ntBASIC20.93■□□□□ 0.94
POLR1AO95602 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1AO95602 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC20.93■□□□□ 0.94
POLR1AO95602 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR1AO95602 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC20.93■□□□□ 0.94
POLR1AO95602 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
POLR1AO95602 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC20.93■□□□□ 0.94
POLR1AO95602 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1AO95602 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
POLR1AO95602 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1AO95602 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1AO95602 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
POLR1AO95602 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1AO95602 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1AO95602 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1AO95602 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1AO95602 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
POLR1AO95602 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC20.93■□□□□ 0.94
POLR1AO95602 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR1AO95602 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR1AO95602 MTHFR-210ENST00000641407 2387 ntBASIC20.93■□□□□ 0.94
POLR1AO95602 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR1AO95602 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1AO95602 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms