Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.04■□□□□ 0.16
EXTL3O43909 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.04■□□□□ 0.16
EXTL3O43909 AL354877.1-201ENST00000424412 413 ntBASIC16.04■□□□□ 0.16
EXTL3O43909 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.04■□□□□ 0.16
EXTL3O43909 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.04■□□□□ 0.16
EXTL3O43909 HSPB1P2-201ENST00000448722 546 ntBASIC16.04■□□□□ 0.16
EXTL3O43909 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.04■□□□□ 0.16
EXTL3O43909 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.04■□□□□ 0.16
EXTL3O43909 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.04■□□□□ 0.16
EXTL3O43909 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.04■□□□□ 0.16
EXTL3O43909 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.04■□□□□ 0.16
EXTL3O43909 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
EXTL3O43909 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.04■□□□□ 0.16
EXTL3O43909 MIR4783-201ENST00000580343 82 ntBASIC16.04■□□□□ 0.16
EXTL3O43909 AC132192.2-201ENST00000596206 1147 ntBASIC16.04■□□□□ 0.16
EXTL3O43909 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.04■□□□□ 0.16
EXTL3O43909 AC244093.1-201ENST00000610837 814 ntBASIC16.04■□□□□ 0.16
EXTL3O43909 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.04■□□□□ 0.16
EXTL3O43909 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.04■□□□□ 0.16
EXTL3O43909 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
EXTL3O43909 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.04■□□□□ 0.16
EXTL3O43909 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
EXTL3O43909 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.04■□□□□ 0.16
EXTL3O43909 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
EXTL3O43909 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.04■□□□□ 0.16
EXTL3O43909 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
EXTL3O43909 AC015802.1-201ENST00000588104 1449 ntBASIC16.03■□□□□ 0.16
EXTL3O43909 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
EXTL3O43909 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
EXTL3O43909 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.03■□□□□ 0.16
EXTL3O43909 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
EXTL3O43909 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.03■□□□□ 0.16
EXTL3O43909 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.03■□□□□ 0.16
EXTL3O43909 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.03■□□□□ 0.16
EXTL3O43909 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.03■□□□□ 0.16
EXTL3O43909 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
EXTL3O43909 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.03■□□□□ 0.16
EXTL3O43909 BTBD6P1-201ENST00000412176 1267 ntBASIC16.03■□□□□ 0.16
EXTL3O43909 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.03■□□□□ 0.16
EXTL3O43909 AC099548.2-209ENST00000480264 625 ntBASIC16.03■□□□□ 0.16
EXTL3O43909 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.03■□□□□ 0.16
EXTL3O43909 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.03■□□□□ 0.16
EXTL3O43909 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.03■□□□□ 0.16
EXTL3O43909 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.03■□□□□ 0.16
EXTL3O43909 FAM45BP-202ENST00000592932 1624 ntBASIC16.03■□□□□ 0.16
EXTL3O43909 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
EXTL3O43909 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
EXTL3O43909 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
EXTL3O43909 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
EXTL3O43909 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
EXTL3O43909 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EXTL3O43909 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EXTL3O43909 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EXTL3O43909 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EXTL3O43909 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EXTL3O43909 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
EXTL3O43909 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EXTL3O43909 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EXTL3O43909 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EXTL3O43909 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
EXTL3O43909 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EXTL3O43909 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EXTL3O43909 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EXTL3O43909 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
EXTL3O43909 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.02■□□□□ 0.16
EXTL3O43909 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EXTL3O43909 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EXTL3O43909 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
EXTL3O43909 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EXTL3O43909 AL162426.1-201ENST00000624141 743 ntBASIC16.02■□□□□ 0.16
EXTL3O43909 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms