Protein–RNA interactions for Protein: O43739

CYTH3, Cytohesin-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3O43739 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.93■□□□□ 0.3
CYTH3O43739 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.93■□□□□ 0.3
CYTH3O43739 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CYTH3O43739 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
CYTH3O43739 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CYTH3O43739 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.93■□□□□ 0.3
CYTH3O43739 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.93■□□□□ 0.3
CYTH3O43739 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CYTH3O43739 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CYTH3O43739 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.93■□□□□ 0.3
CYTH3O43739 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.93■□□□□ 0.3
CYTH3O43739 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.93■□□□□ 0.3
CYTH3O43739 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.93■□□□□ 0.3
CYTH3O43739 HIST2H2BC-201ENST00000498492 580 ntBASIC16.93■□□□□ 0.3
CYTH3O43739 AC013355.1-201ENST00000562625 723 ntBASIC16.93■□□□□ 0.3
CYTH3O43739 AC009884.2-201ENST00000603110 324 ntBASIC16.93■□□□□ 0.3
CYTH3O43739 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 AC005912.2-201ENST00000619492 2400 ntBASIC16.93■□□□□ 0.3
CYTH3O43739 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.93■□□□□ 0.3
CYTH3O43739 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CYTH3O43739 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.93■□□□□ 0.3
CYTH3O43739 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CYTH3O43739 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.92■□□□□ 0.3
CYTH3O43739 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.92■□□□□ 0.3
CYTH3O43739 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.92■□□□□ 0.3
CYTH3O43739 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.92■□□□□ 0.3
CYTH3O43739 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.92■□□□□ 0.3
CYTH3O43739 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.92■□□□□ 0.3
CYTH3O43739 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CYTH3O43739 AKR7A2P1-201ENST00000460134 915 ntBASIC16.92■□□□□ 0.3
CYTH3O43739 AC005740.2-201ENST00000511085 419 ntBASIC16.92■□□□□ 0.3
CYTH3O43739 AC022217.1-201ENST00000521069 738 ntBASIC16.92■□□□□ 0.3
CYTH3O43739 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.92■□□□□ 0.3
CYTH3O43739 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.92■□□□□ 0.3
CYTH3O43739 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.92■□□□□ 0.3
CYTH3O43739 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.92■□□□□ 0.3
CYTH3O43739 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.92■□□□□ 0.3
CYTH3O43739 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.92■□□□□ 0.3
CYTH3O43739 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.92■□□□□ 0.3
CYTH3O43739 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.92■□□□□ 0.3
CYTH3O43739 AC008805.1-201ENST00000590892 364 ntBASIC16.92■□□□□ 0.3
CYTH3O43739 AL645939.5-201ENST00000606834 243 ntBASIC16.92■□□□□ 0.3
CYTH3O43739 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.92■□□□□ 0.3
CYTH3O43739 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CYTH3O43739 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CYTH3O43739 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CYTH3O43739 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CYTH3O43739 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.92■□□□□ 0.3
CYTH3O43739 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.92■□□□□ 0.3
CYTH3O43739 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.92■□□□□ 0.3
CYTH3O43739 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTH3O43739 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTH3O43739 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTH3O43739 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.91■□□□□ 0.3
CYTH3O43739 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTH3O43739 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTH3O43739 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms