Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD2O14647 CELP-203ENST00000624767 2414 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD2O14647 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD2O14647 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHD2O14647 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHD2O14647 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHD2O14647 SNX15-201ENST00000352068 771 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD2O14647 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC19.84■□□□□ 0.77
CHD2O14647 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC19.84■□□□□ 0.77
CHD2O14647 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC19.84■□□□□ 0.77
CHD2O14647 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC19.84■□□□□ 0.77
CHD2O14647 AC005777.1-201ENST00000588332 187 ntBASIC19.84■□□□□ 0.77
CHD2O14647 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC19.84■□□□□ 0.77
CHD2O14647 AC139713.2-207ENST00000641556 1292 ntBASIC19.84■□□□□ 0.77
CHD2O14647 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD2O14647 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD2O14647 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD2O14647 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CHD2O14647 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHD2O14647 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD2O14647 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD2O14647 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
CHD2O14647 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD2O14647 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD2O14647 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD2O14647 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CHD2O14647 SSR4-202ENST00000370085 526 ntTSL 2 BASIC19.83■□□□□ 0.77
CHD2O14647 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD2O14647 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD2O14647 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.83■□□□□ 0.77
CHD2O14647 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.83■□□□□ 0.77
CHD2O14647 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHD2O14647 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHD2O14647 AC008536.3-201ENST00000623282 1599 ntBASIC19.83■□□□□ 0.77
CHD2O14647 BX322534.1-201ENST00000635574 241 ntBASIC19.83■□□□□ 0.77
CHD2O14647 AC215524.1-201ENST00000635696 241 ntBASIC19.83■□□□□ 0.77
CHD2O14647 AC020931.1-201ENST00000589622 1346 ntBASIC19.83■□□□□ 0.77
CHD2O14647 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19.83■□□□□ 0.77
CHD2O14647 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHD2O14647 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CHD2O14647 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC19.83■□□□□ 0.76
CHD2O14647 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC19.83■□□□□ 0.76
CHD2O14647 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHD2O14647 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHD2O14647 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC19.83■□□□□ 0.76
CHD2O14647 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC19.83■□□□□ 0.76
CHD2O14647 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC19.83■□□□□ 0.76
CHD2O14647 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC19.83■□□□□ 0.76
CHD2O14647 AC073869.4-201ENST00000620841 800 ntBASIC19.83■□□□□ 0.76
CHD2O14647 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC19.83■□□□□ 0.76
CHD2O14647 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CHD2O14647 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHD2O14647 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC19.82■□□□□ 0.76
CHD2O14647 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.82■□□□□ 0.76
CHD2O14647 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC19.82■□□□□ 0.76
CHD2O14647 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD2O14647 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD2O14647 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.82■□□□□ 0.76
CHD2O14647 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD2O14647 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC19.82■□□□□ 0.76
CHD2O14647 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD2O14647 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD2O14647 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC19.82■□□□□ 0.76
CHD2O14647 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD2O14647 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHD2O14647 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD2O14647 OR2W2P-201ENST00000406313 909 ntBASIC19.82■□□□□ 0.76
CHD2O14647 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC19.82■□□□□ 0.76
CHD2O14647 KRT8P30-201ENST00000432100 650 ntBASIC19.82■□□□□ 0.76
CHD2O14647 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC19.82■□□□□ 0.76
CHD2O14647 AC100858.1-201ENST00000514059 1228 ntBASIC19.82■□□□□ 0.76
CHD2O14647 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC19.82■□□□□ 0.76
CHD2O14647 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC19.82■□□□□ 0.76
CHD2O14647 AC004801.1-201ENST00000549557 360 ntBASIC19.82■□□□□ 0.76
CHD2O14647 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CHD2O14647 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHD2O14647 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC19.82■□□□□ 0.76
CHD2O14647 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHD2O14647 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC19.82■□□□□ 0.76
CHD2O14647 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD2O14647 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD2O14647 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CHD2O14647 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD2O14647 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC19.82■□□□□ 0.76
CHD2O14647 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD2O14647 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.82■□□□□ 0.76
CHD2O14647 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC19.82■□□□□ 0.76
CHD2O14647 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHD2O14647 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.82■□□□□ 0.76
CHD2O14647 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC19.81■□□□□ 0.76
CHD2O14647 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 AC078814.4-201ENST00000546650 327 ntBASIC19.81■□□□□ 0.76
CHD2O14647 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC19.81■□□□□ 0.76
CHD2O14647 MT3-202ENST00000561640 514 ntTSL 3 BASIC19.81■□□□□ 0.76
CHD2O14647 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 NEK4P3-201ENST00000604859 544 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms