Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM38O00635 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRIM38O00635 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM38O00635 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM38O00635 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRIM38O00635 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM38O00635 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM38O00635 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM38O00635 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRIM38O00635 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRIM38O00635 CD8B2-202ENST00000417670 633 ntBASIC14.99□□□□□ -0.01
TRIM38O00635 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.99□□□□□ -0.01
TRIM38O00635 MTX1P1-201ENST00000440904 838 ntBASIC14.99□□□□□ -0.01
TRIM38O00635 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM38O00635 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM38O00635 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM38O00635 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM38O00635 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM38O00635 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM38O00635 AC104982.3-201ENST00000581995 514 ntBASIC14.99□□□□□ -0.01
TRIM38O00635 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM38O00635 EEF1DP1-201ENST00000585891 896 ntBASIC14.99□□□□□ -0.01
TRIM38O00635 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.99□□□□□ -0.01
TRIM38O00635 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM38O00635 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
TRIM38O00635 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TRIM38O00635 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.99□□□□□ -0.01
TRIM38O00635 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
TRIM38O00635 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRIM38O00635 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM38O00635 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM38O00635 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRIM38O00635 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM38O00635 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRIM38O00635 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM38O00635 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM38O00635 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM38O00635 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRIM38O00635 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM38O00635 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 CALR4P-201ENST00000431943 946 ntBASIC14.98□□□□□ -0.01
TRIM38O00635 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM38O00635 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM38O00635 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM38O00635 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM38O00635 AP006547.1-201ENST00000563435 692 ntBASIC14.98□□□□□ -0.01
TRIM38O00635 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM38O00635 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM38O00635 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRIM38O00635 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
TRIM38O00635 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
TRIM38O00635 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TRIM38O00635 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM38O00635 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRIM38O00635 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRIM38O00635 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM38O00635 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM38O00635 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms