Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC28A1O00337 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A1O00337 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC28A1O00337 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A1O00337 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A1O00337 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC28A1O00337 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SLC28A1O00337 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 AC020910.6-201ENST00000623084 1459 ntBASIC14.31□□□□□ -0.12
SLC28A1O00337 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 TCAM1P-207ENST00000485295 1537 ntBASIC14.31□□□□□ -0.12
SLC28A1O00337 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SLC28A1O00337 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC28A1O00337 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 AC011474.4-201ENST00000623523 2076 ntBASIC14.31□□□□□ -0.12
SLC28A1O00337 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SLC28A1O00337 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC28A1O00337 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 AL162726.2-201ENST00000438986 1017 ntBASIC14.31□□□□□ -0.12
SLC28A1O00337 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.31□□□□□ -0.12
SLC28A1O00337 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC28A1O00337 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC28A1O00337 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SLC28A1O00337 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SLC28A1O00337 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SLC28A1O00337 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SLC28A1O00337 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A1O00337 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SLC28A1O00337 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
SLC28A1O00337 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC28A1O00337 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SLC28A1O00337 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SLC28A1O00337 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 AC215219.1-201ENST00000400706 1817 ntBASIC14.3□□□□□ -0.12
SLC28A1O00337 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SLC28A1O00337 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC28A1O00337 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.3□□□□□ -0.12
SLC28A1O00337 UGT1A2P-201ENST00000454886 866 ntBASIC14.3□□□□□ -0.12
SLC28A1O00337 SERBP1P5-201ENST00000510079 1181 ntBASIC14.3□□□□□ -0.12
SLC28A1O00337 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.3□□□□□ -0.12
SLC28A1O00337 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC28A1O00337 CLUHP6-201ENST00000580789 941 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms