Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDC7O00311 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC7O00311 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.57□□□□□ -0.08
CDC7O00311 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.57□□□□□ -0.08
CDC7O00311 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.57□□□□□ -0.08
CDC7O00311 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC7O00311 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CDC7O00311 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CDC7O00311 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC7O00311 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC7O00311 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CDC7O00311 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC7O00311 AC009093.2-202ENST00000620513 2079 ntBASIC14.56□□□□□ -0.08
CDC7O00311 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC7O00311 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC7O00311 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CDC7O00311 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CDC7O00311 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CDC7O00311 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC7O00311 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC7O00311 AC098614.1-201ENST00000368528 745 ntBASIC14.56□□□□□ -0.08
CDC7O00311 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.56□□□□□ -0.08
CDC7O00311 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDC7O00311 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC7O00311 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.56□□□□□ -0.08
CDC7O00311 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.56□□□□□ -0.08
CDC7O00311 RN7SL48P-201ENST00000579283 293 ntBASIC14.56□□□□□ -0.08
CDC7O00311 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.56□□□□□ -0.08
CDC7O00311 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.56□□□□□ -0.08
CDC7O00311 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.56□□□□□ -0.08
CDC7O00311 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.56□□□□□ -0.08
CDC7O00311 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC7O00311 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.56□□□□□ -0.08
CDC7O00311 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
CDC7O00311 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC7O00311 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
CDC7O00311 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDC7O00311 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC7O00311 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC7O00311 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC7O00311 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC7O00311 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CDC7O00311 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC7O00311 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CDC7O00311 RN7SL832P-201ENST00000607781 1756 ntBASIC14.55□□□□□ -0.08
CDC7O00311 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 AC215219.1-201ENST00000400706 1817 ntBASIC14.55□□□□□ -0.08
CDC7O00311 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC7O00311 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.55□□□□□ -0.08
CDC7O00311 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC7O00311 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CDC7O00311 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.55□□□□□ -0.08
CDC7O00311 AL355864.2-201ENST00000447420 863 ntBASIC14.55□□□□□ -0.08
CDC7O00311 FTLP10-202ENST00000505798 471 ntBASIC14.55□□□□□ -0.08
CDC7O00311 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.55□□□□□ -0.08
CDC7O00311 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC7O00311 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CDC7O00311 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CDC7O00311 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CDC7O00311 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.55□□□□□ -0.08
CDC7O00311 MIR3197-201ENST00000582241 73 ntBASIC14.55□□□□□ -0.08
CDC7O00311 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.55□□□□□ -0.08
CDC7O00311 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.55□□□□□ -0.08
CDC7O00311 ECM1P1-201ENST00000604092 1279 ntBASIC14.55□□□□□ -0.08
CDC7O00311 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CDC7O00311 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
CDC7O00311 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.55□□□□□ -0.08
CDC7O00311 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC7O00311 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CDC7O00311 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC7O00311 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CDC7O00311 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC7O00311 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC7O00311 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDC7O00311 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDC7O00311 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.55□□□□□ -0.08
CDC7O00311 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC7O00311 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms