Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 AL356585.2-201ENST00000625078 2396 ntBASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 AL138799.1-201ENST00000448213 1675 ntBASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 AC004461.1-201ENST00000412461 403 ntBASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 AC093520.2-201ENST00000561830 333 ntBASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 COL6A4P2-202ENST00000504443 2753 ntBASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
DUXBA0A1W2PPF3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 MRPL37P1-201ENST00000592451 1337 ntBASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 SALL4P5-201ENST00000419001 1760 ntBASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 ALG1L5P-201ENST00000482043 771 ntBASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 SLC25A1P1-201ENST00000528351 927 ntBASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 AC092337.1-201ENST00000568699 1129 ntBASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 AC004835.2-201ENST00000603762 682 ntBASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 PRSS30P-206ENST00000641773 873 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms