Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 TP73-211ENST00000604074 4806 ntTSL 5 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 UCKL1-AS1-201ENST00000623569 3602 ntBASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 NSL1-201ENST00000366976 722 ntTSL 2 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 WASH4P-201ENST00000564273 1246 ntBASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 AP001063.1-201ENST00000568332 529 ntBASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 PAM16-204ENST00000571941 674 ntTSL 3 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 CTBP2P3-201ENST00000585629 1255 ntBASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 AC092364.2-202ENST00000597012 1073 ntBASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 WFDC1-204ENST00000613603 549 ntBASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 AL033527.5-201ENST00000641382 801 ntBASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 PRSS30P-206ENST00000641773 873 ntBASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 AC023090.2-201ENST00000625182 2110 ntBASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 KRT8P35-201ENST00000483942 1338 ntBASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRGV1A0A0A0MS02 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
TRGV1A0A0A0MS02 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 AC117489.1-201ENST00000625169 3217 ntBASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms