Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 TEKT4P2-202ENST00000559466 1312 ntBASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 MIR1301-201ENST00000408518 82 ntBASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 AC018638.5-201ENST00000450885 754 ntBASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 CYP4F36P-201ENST00000589193 186 ntBASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 SIGLEC22P-201ENST00000599104 714 ntBASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 AC105250.1-201ENST00000509378 2057 ntBASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 AC008894.3-201ENST00000624324 3103 ntBASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCH2Q9Y6C5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 PYY2-201ENST00000315776 282 ntBASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 PTGER4P2-201ENST00000328411 252 ntBASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 AC004522.1-201ENST00000419978 654 ntBASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 PTGER4P3-201ENST00000458150 252 ntBASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 AC233280.19-201ENST00000633223 136 ntBASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTCH2Q9Y6C5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PTCH2Q9Y6C5 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.46■□□□□ 0.22
PTCH2Q9Y6C5 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.46■□□□□ 0.22
PTCH2Q9Y6C5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PTCH2Q9Y6C5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
PTCH2Q9Y6C5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms