Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 SNX29P1-201ENST00000548357 1007 ntBASIC12.63□□□□□ -0.39
CLN8Q9UBY8 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 RN7SL48P-201ENST00000579283 293 ntBASIC12.63□□□□□ -0.39
CLN8Q9UBY8 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 AC138951.2-201ENST00000623455 1161 ntBASIC12.63□□□□□ -0.39
CLN8Q9UBY8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.62□□□□□ -0.39
CLN8Q9UBY8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 AL138709.1-201ENST00000614840 1693 ntBASIC12.62□□□□□ -0.39
CLN8Q9UBY8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 RNA5SP486-201ENST00000515961 83 ntBASIC12.62□□□□□ -0.39
CLN8Q9UBY8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLN8Q9UBY8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms