Protein–RNA interactions for Protein: Q9P2K3

RCOR3, REST corepressor 3, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3Q9P2K3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCOR3Q9P2K3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.23■□□□□ 0.03
RCOR3Q9P2K3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 AC027601.5-201ENST00000624065 2482 ntBASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 CNN2P10-201ENST00000443067 918 ntBASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 AC027237.1-201ENST00000560942 655 ntBASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 AL359881.2-201ENST00000602973 570 ntBASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
RCOR3Q9P2K3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 AC020910.6-201ENST00000623084 1459 ntBASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 AL161772.1-201ENST00000610494 4412 ntBASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 AC112492.5-201ENST00000421897 457 ntBASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 AC234783.1-201ENST00000441761 496 ntBASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 AC023310.1-201ENST00000554836 735 ntBASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 PPY2P-201ENST00000582808 702 ntBASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 AC008687.7-202ENST00000637404 953 ntBASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCOR3Q9P2K3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RCOR3Q9P2K3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RCOR3Q9P2K3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
RCOR3Q9P2K3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.02
RCOR3Q9P2K3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCOR3Q9P2K3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RCOR3Q9P2K3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RCOR3Q9P2K3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RCOR3Q9P2K3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCOR3Q9P2K3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RCOR3Q9P2K3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.2■□□□□ 0.02
RCOR3Q9P2K3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCOR3Q9P2K3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RCOR3Q9P2K3 AC136759.1-202ENST00000530858 2194 ntBASIC15.2■□□□□ 0.02
RCOR3Q9P2K3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms