Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 ACTG1P14-201ENST00000446382 1122 ntBASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 AC140113.2-201ENST00000604370 208 ntBASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 AC025181.2-201ENST00000606994 802 ntBASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 IL9RP2-201ENST00000423948 1312 ntBASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 LILRP1-201ENST00000444199 1370 ntBASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 KRT8P12-202ENST00000472924 1397 ntBASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SND1-IT1Q9HBX3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 INE2-201ENST00000630399 1874 ntBASIC10□□□□□ -0.81
SND1-IT1Q9HBX3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms