Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 AC092933.1-201ENST00000393644 945 ntBASIC14.18□□□□□ -0.14
BRF2Q9HAW0 CD8B2-202ENST00000417670 633 ntBASIC14.18□□□□□ -0.14
BRF2Q9HAW0 HMGN1P19-201ENST00000436976 333 ntBASIC14.18□□□□□ -0.14
BRF2Q9HAW0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 RNA5SP486-201ENST00000515961 83 ntBASIC14.18□□□□□ -0.14
BRF2Q9HAW0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.18□□□□□ -0.14
BRF2Q9HAW0 AC006504.5-208ENST00000588784 2401 ntBASIC14.17□□□□□ -0.14
BRF2Q9HAW0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 C8orf49-201ENST00000525043 1968 ntBASIC14.17□□□□□ -0.14
BRF2Q9HAW0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.17□□□□□ -0.14
BRF2Q9HAW0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 USP32P1-208ENST00000506594 1164 ntBASIC14.17□□□□□ -0.14
BRF2Q9HAW0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 SLC25A47P1-201ENST00000531577 414 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms