Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 AC097493.3-201ENST00000509725 367 ntBASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 HNRNPUP1-201ENST00000554987 333 ntBASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 AL158211.3-201ENST00000607385 239 ntBASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 AJ011932.1-201ENST00000621707 465 ntBASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KLHL4Q9C0H6 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 AC023794.5-201ENST00000564380 2157 ntBASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 AC027369.6-201ENST00000525520 931 ntBASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.42□□□□□ -0.1
KLHL4Q9C0H6 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms