Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 DGCR5-201ENST00000399539 862 ntBASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 AC007969.1-201ENST00000433675 447 ntBASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 RPSAP52-203ENST00000622976 1023 ntBASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.75■□□□□ 0.43
UPF3BQ9BZI7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 CICP16-201ENST00000502609 2813 ntBASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 INE2-201ENST00000630399 1874 ntBASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 ACKR1-201ENST00000368121 1240 ntBASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 AL162726.2-201ENST00000438986 1017 ntBASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 AC022137.2-201ENST00000503482 481 ntBASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
UPF3BQ9BZI7 AC020910.5-201ENST00000623668 1865 ntBASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms