Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.34□□□□□ -0.59
VGLL1Q99990 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.34□□□□□ -0.59
VGLL1Q99990 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.34□□□□□ -0.59
VGLL1Q99990 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.34□□□□□ -0.59
VGLL1Q99990 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.34□□□□□ -0.59
VGLL1Q99990 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.34□□□□□ -0.59
VGLL1Q99990 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
VGLL1Q99990 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.34□□□□□ -0.59
VGLL1Q99990 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.34□□□□□ -0.59
VGLL1Q99990 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
VGLL1Q99990 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
VGLL1Q99990 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
VGLL1Q99990 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
VGLL1Q99990 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.34□□□□□ -0.59
VGLL1Q99990 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.34□□□□□ -0.59
VGLL1Q99990 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
VGLL1Q99990 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.34□□□□□ -0.59
VGLL1Q99990 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
VGLL1Q99990 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
VGLL1Q99990 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.34□□□□□ -0.59
VGLL1Q99990 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
VGLL1Q99990 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
VGLL1Q99990 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.33□□□□□ -0.6
VGLL1Q99990 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.33□□□□□ -0.6
VGLL1Q99990 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
VGLL1Q99990 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 CLK3P2-201ENST00000427566 1453 ntBASIC11.33□□□□□ -0.6
VGLL1Q99990 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.33□□□□□ -0.6
VGLL1Q99990 MST1P2-201ENST00000457982 2291 ntBASIC11.33□□□□□ -0.6
VGLL1Q99990 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.33□□□□□ -0.6
VGLL1Q99990 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
VGLL1Q99990 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
VGLL1Q99990 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
VGLL1Q99990 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
VGLL1Q99990 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.33□□□□□ -0.6
VGLL1Q99990 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.33□□□□□ -0.6
VGLL1Q99990 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.33□□□□□ -0.6
VGLL1Q99990 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 MEIS3P1-201ENST00000495167 958 ntBASIC11.33□□□□□ -0.6
VGLL1Q99990 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.33□□□□□ -0.6
VGLL1Q99990 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.33□□□□□ -0.6
VGLL1Q99990 AC092337.1-201ENST00000568699 1129 ntBASIC11.33□□□□□ -0.6
VGLL1Q99990 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.33□□□□□ -0.6
VGLL1Q99990 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.33□□□□□ -0.6
VGLL1Q99990 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.33□□□□□ -0.6
VGLL1Q99990 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.33□□□□□ -0.6
VGLL1Q99990 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
VGLL1Q99990 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.33□□□□□ -0.6
VGLL1Q99990 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.33□□□□□ -0.6
VGLL1Q99990 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC11.33□□□□□ -0.6
VGLL1Q99990 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VGLL1Q99990 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
VGLL1Q99990 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms