Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CDC6Q99741 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CDC6Q99741 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.29□□□□□ -0.12
CDC6Q99741 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.29□□□□□ -0.12
CDC6Q99741 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDC6Q99741 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 AC092127.1-201ENST00000567093 3455 ntBASIC14.29□□□□□ -0.12
CDC6Q99741 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.29□□□□□ -0.12
CDC6Q99741 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC6Q99741 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC6Q99741 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.29□□□□□ -0.12
CDC6Q99741 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC14.29□□□□□ -0.12
CDC6Q99741 DUTP3-201ENST00000450025 415 ntBASIC14.29□□□□□ -0.12
CDC6Q99741 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC6Q99741 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CDC6Q99741 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.29□□□□□ -0.12
CDC6Q99741 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.29□□□□□ -0.12
CDC6Q99741 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC6Q99741 MIR6756-201ENST00000616240 63 ntBASIC14.29□□□□□ -0.12
CDC6Q99741 AL132780.4-201ENST00000624870 1135 ntBASIC14.29□□□□□ -0.12
CDC6Q99741 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC6Q99741 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDC6Q99741 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CDC6Q99741 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDC6Q99741 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
CDC6Q99741 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.29□□□□□ -0.12
CDC6Q99741 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
CDC6Q99741 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.29□□□□□ -0.12
CDC6Q99741 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.29□□□□□ -0.12
CDC6Q99741 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC6Q99741 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDC6Q99741 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CDC6Q99741 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.28□□□□□ -0.12
CDC6Q99741 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDC6Q99741 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC6Q99741 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDC6Q99741 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.28□□□□□ -0.12
CDC6Q99741 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CDC6Q99741 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDC6Q99741 MIR1227-201ENST00000408484 88 ntBASIC14.28□□□□□ -0.12
CDC6Q99741 BANF1P3-201ENST00000412556 261 ntBASIC14.28□□□□□ -0.12
CDC6Q99741 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC6Q99741 PIN4P1-201ENST00000451079 396 ntBASIC14.28□□□□□ -0.12
CDC6Q99741 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.28□□□□□ -0.12
CDC6Q99741 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.28□□□□□ -0.12
CDC6Q99741 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC14.28□□□□□ -0.12
CDC6Q99741 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC6Q99741 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC6Q99741 AC092384.3-202ENST00000564646 2873 ntBASIC14.28□□□□□ -0.12
CDC6Q99741 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC6Q99741 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC14.28□□□□□ -0.12
CDC6Q99741 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CDC6Q99741 AC005357.2-202ENST00000590507 1060 ntBASIC14.28□□□□□ -0.12
CDC6Q99741 SIGLEC18P-201ENST00000602271 909 ntBASIC14.28□□□□□ -0.12
CDC6Q99741 REXO1L4P-201ENST00000605109 1937 ntBASIC14.28□□□□□ -0.12
CDC6Q99741 MEG3_2.1-201ENST00000611456 105 ntBASIC14.28□□□□□ -0.12
CDC6Q99741 MIR6858-201ENST00000620733 67 ntBASIC14.28□□□□□ -0.12
CDC6Q99741 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CDC6Q99741 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.28□□□□□ -0.12
CDC6Q99741 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDC6Q99741 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
CDC6Q99741 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC6Q99741 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms