Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 AHCYP2-201ENST00000430630 1300 ntBASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 U91328.1-201ENST00000437528 223 ntBASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 KRT17P8-201ENST00000540749 863 ntBASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 C2orf69P2-201ENST00000562032 1123 ntBASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSPG4P5Q96PW8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CSPG4P5Q96PW8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CSPG4P5Q96PW8 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSPG4P5Q96PW8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSPG4P5Q96PW8 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSPG4P5Q96PW8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CSPG4P5Q96PW8 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.27■□□□□ 0.03
CSPG4P5Q96PW8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.27■□□□□ 0.03
CSPG4P5Q96PW8 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CSPG4P5Q96PW8 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
CSPG4P5Q96PW8 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.27■□□□□ 0.03
CSPG4P5Q96PW8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CSPG4P5Q96PW8 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSPG4P5Q96PW8 AC090505.1-201ENST00000430515 1834 ntBASIC15.27■□□□□ 0.03
CSPG4P5Q96PW8 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 AC079776.1-201ENST00000401540 1152 ntBASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 AL136309.1-201ENST00000403917 691 ntBASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 BOLA2P3-201ENST00000404566 256 ntBASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 AC112492.5-201ENST00000421897 457 ntBASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 AC005034.1-201ENST00000426657 489 ntBASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 AL512343.1-201ENST00000605837 169 ntBASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 AL358472.3-201ENST00000608147 415 ntBASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSPG4P5Q96PW8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms