Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 AC010141.1-201ENST00000411585 623 ntBASIC12.32□□□□□ -0.44
GAFA1Q96PS6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 EEF1DP1-201ENST00000585891 896 ntBASIC12.32□□□□□ -0.44
GAFA1Q96PS6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 AC010328.2-201ENST00000597698 1111 ntBASIC12.32□□□□□ -0.44
GAFA1Q96PS6 AC009542.2-202ENST00000619004 1067 ntBASIC12.32□□□□□ -0.44
GAFA1Q96PS6 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 AC097359.2-201ENST00000604992 2389 ntBASIC12.32□□□□□ -0.44
GAFA1Q96PS6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 SHC1P1-201ENST00000425230 1745 ntBASIC12.31□□□□□ -0.44
GAFA1Q96PS6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 AC015802.1-201ENST00000588104 1449 ntBASIC12.31□□□□□ -0.44
GAFA1Q96PS6 AC015656.1-201ENST00000624209 3578 ntBASIC12.31□□□□□ -0.44
GAFA1Q96PS6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 MIR326-201ENST00000362220 95 ntBASIC12.31□□□□□ -0.44
GAFA1Q96PS6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 AC079178.1-201ENST00000420915 656 ntBASIC12.31□□□□□ -0.44
GAFA1Q96PS6 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 CICP12-201ENST00000455801 843 ntBASIC12.31□□□□□ -0.44
GAFA1Q96PS6 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 AC100850.1-201ENST00000506768 649 ntBASIC12.31□□□□□ -0.44
GAFA1Q96PS6 RNA5SP412-201ENST00000516234 123 ntBASIC12.31□□□□□ -0.44
GAFA1Q96PS6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 AC008825.2-201ENST00000603374 718 ntBASIC12.31□□□□□ -0.44
GAFA1Q96PS6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GAFA1Q96PS6 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms