Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 AC011840.2-201ENST00000563063 1520 ntBASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 SDHAP3-202ENST00000515467 728 ntBASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 AC051619.7-201ENST00000568314 623 ntBASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 AC009093.7-201ENST00000623853 1223 ntBASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NSMCE2Q96MF7 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 MYADML-201ENST00000474610 2147 ntBASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 AL645937.2-201ENST00000396808 931 ntBASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 GAPDHP40-201ENST00000505218 1006 ntBASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 AC010336.2-201ENST00000564226 506 ntBASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 AC005829.1-201ENST00000570002 483 ntBASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NSMCE2Q96MF7 COL6A4P2-202ENST00000504443 2753 ntBASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms