Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 AC087499.5-201ENST00000452760 1342 ntBASIC13□□□□□ -0.33
FOXRED1Q96CU9 AC093525.8-201ENST00000624099 1342 ntBASIC13□□□□□ -0.33
FOXRED1Q96CU9 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13□□□□□ -0.33
FOXRED1Q96CU9 AC092580.3-201ENST00000430932 139 ntBASIC13□□□□□ -0.33
FOXRED1Q96CU9 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 AJ011932.1-201ENST00000621707 465 ntBASIC13□□□□□ -0.33
FOXRED1Q96CU9 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
FOXRED1Q96CU9 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13□□□□□ -0.33
FOXRED1Q96CU9 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 INE2-201ENST00000630399 1874 ntBASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 AL731571.1-201ENST00000617058 5428 ntBASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 AL096865.1-201ENST00000606796 927 ntBASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXRED1Q96CU9 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms