Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CHCHD1Q96BP2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CHCHD1Q96BP2 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC10.82□□□□□ -0.68
CHCHD1Q96BP2 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CHCHD1Q96BP2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CHCHD1Q96BP2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
CHCHD1Q96BP2 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CHCHD1Q96BP2 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 F2-205ENST00000530231 1849 ntTSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 AL031719.1-201ENST00000623365 2587 ntBASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 FTO-214ENST00000636218 2227 ntTSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 EMD-201ENST00000369835 966 ntTSL 3 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 NME4-207ENST00000450036 985 ntTSL 3 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 TSPY20P-201ENST00000450910 630 ntBASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 RNA5SP410-201ENST00000516285 106 ntBASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 AP000867.3-201ENST00000524675 377 ntBASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 AC025181.2-201ENST00000606994 802 ntBASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 AC006011.2-201ENST00000621313 1158 ntBASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 MIR1199-201ENST00000621445 119 ntBASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 AL355877.3-201ENST00000622820 899 ntBASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 AL360270.3-201ENST00000609118 1348 ntBASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CHCHD1Q96BP2 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 BX324167.2-201ENST00000623717 3316 ntBASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC10.8□□□□□ -0.68
CHCHD1Q96BP2 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms