Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.67□□□□□ -0.38
USP9XQ93008 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC12.67□□□□□ -0.38
USP9XQ93008 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
USP9XQ93008 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.66□□□□□ -0.38
USP9XQ93008 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC12.66□□□□□ -0.38
USP9XQ93008 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
USP9XQ93008 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC12.66□□□□□ -0.38
USP9XQ93008 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.66□□□□□ -0.38
USP9XQ93008 SIGLEC22P-201ENST00000599104 714 ntBASIC12.66□□□□□ -0.38
USP9XQ93008 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC12.66□□□□□ -0.38
USP9XQ93008 AC007250.1-201ENST00000608934 338 ntBASIC12.66□□□□□ -0.38
USP9XQ93008 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
USP9XQ93008 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.66□□□□□ -0.38
USP9XQ93008 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.66□□□□□ -0.38
USP9XQ93008 AC067931.2-201ENST00000623655 2003 ntBASIC12.66□□□□□ -0.38
USP9XQ93008 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.66□□□□□ -0.38
USP9XQ93008 AC092850.2-201ENST00000623821 2697 ntBASIC12.66□□□□□ -0.38
USP9XQ93008 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
USP9XQ93008 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
USP9XQ93008 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.66□□□□□ -0.38
USP9XQ93008 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
USP9XQ93008 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC12.66□□□□□ -0.38
USP9XQ93008 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC12.66□□□□□ -0.38
USP9XQ93008 CDK4P1-201ENST00000454213 828 ntBASIC12.66□□□□□ -0.38
USP9XQ93008 MIR2278-201ENST00000516344 96 ntBASIC12.66□□□□□ -0.38
USP9XQ93008 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
USP9XQ93008 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.66□□□□□ -0.38
USP9XQ93008 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
USP9XQ93008 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.66□□□□□ -0.38
USP9XQ93008 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USP9XQ93008 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
USP9XQ93008 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
USP9XQ93008 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
USP9XQ93008 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 RN7SL277P-201ENST00000481521 288 ntBASIC12.65□□□□□ -0.38
USP9XQ93008 KRT18P37-201ENST00000520711 1282 ntBASIC12.65□□□□□ -0.38
USP9XQ93008 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC12.65□□□□□ -0.38
USP9XQ93008 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC12.65□□□□□ -0.38
USP9XQ93008 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.65□□□□□ -0.38
USP9XQ93008 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 BRD7P5-201ENST00000299197 1822 ntBASIC12.65□□□□□ -0.38
USP9XQ93008 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.65□□□□□ -0.38
USP9XQ93008 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
USP9XQ93008 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.65□□□□□ -0.38
USP9XQ93008 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC12.65□□□□□ -0.38
USP9XQ93008 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.65□□□□□ -0.38
USP9XQ93008 AC138761.6-201ENST00000583997 1423 ntBASIC12.65□□□□□ -0.38
USP9XQ93008 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
USP9XQ93008 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.65□□□□□ -0.38
USP9XQ93008 AL591122.2-201ENST00000624125 1853 ntBASIC12.65□□□□□ -0.38
USP9XQ93008 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
USP9XQ93008 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
USP9XQ93008 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
USP9XQ93008 CDCA4P4-201ENST00000435216 680 ntBASIC12.65□□□□□ -0.39
USP9XQ93008 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC12.65□□□□□ -0.39
USP9XQ93008 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
USP9XQ93008 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC12.65□□□□□ -0.39
USP9XQ93008 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC12.65□□□□□ -0.39
USP9XQ93008 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
USP9XQ93008 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.65□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms