Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 TUBBP5-203ENST00000508529 1334 ntBASIC13.24□□□□□ -0.29
RNF138Q8WVD3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 HSPA7-201ENST00000445535 1927 ntBASIC13.24□□□□□ -0.29
RNF138Q8WVD3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.24□□□□□ -0.29
RNF138Q8WVD3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 AC026740.1-201ENST00000607068 791 ntBASIC13.24□□□□□ -0.29
RNF138Q8WVD3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RNF138Q8WVD3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 AC152010.1-201ENST00000415779 2006 ntBASIC13.23□□□□□ -0.29
RNF138Q8WVD3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 AKR7A2P1-201ENST00000460134 915 ntBASIC13.23□□□□□ -0.29
RNF138Q8WVD3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 AC020914.3-201ENST00000594712 304 ntBASIC13.23□□□□□ -0.29
RNF138Q8WVD3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 AC021016.3-201ENST00000608367 477 ntBASIC13.23□□□□□ -0.29
RNF138Q8WVD3 MIR6787-201ENST00000616675 61 ntBASIC13.23□□□□□ -0.29
RNF138Q8WVD3 AC244452.3-201ENST00000636814 210 ntBASIC13.23□□□□□ -0.29
RNF138Q8WVD3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF138Q8WVD3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RNF138Q8WVD3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
RNF138Q8WVD3 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.22□□□□□ -0.29
RNF138Q8WVD3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RNF138Q8WVD3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RNF138Q8WVD3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
RNF138Q8WVD3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms