Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 AL928921.2-201ENST00000641325 2442 ntBASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 FAM21FP-201ENST00000426241 1131 ntBASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 AC245100.3-201ENST00000441281 285 ntBASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 GCOM2-201ENST00000509133 1104 ntBASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 AC023310.1-201ENST00000554836 735 ntBASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 AC006453.4-201ENST00000636949 1252 ntBASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 MYADML-201ENST00000474610 2147 ntBASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 AC011840.2-201ENST00000563063 1520 ntBASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCC2Q8TAQ2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 INE2-201ENST00000630399 1874 ntBASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 LINC01230-201ENST00000625222 3017 ntBASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 MIR1202-201ENST00000408529 83 ntBASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 YBX1P6-201ENST00000442962 1002 ntBASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 AP001002.3-201ENST00000623482 206 ntBASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 MRPL37P1-201ENST00000592451 1337 ntBASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 AC090505.1-201ENST00000430515 1834 ntBASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 AC006504.5-208ENST00000588784 2401 ntBASIC17.35■□□□□ 0.37
SMARCC2Q8TAQ2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms