Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 AC020904.3-201ENST00000624199 442 ntBASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 FAM197Y6-201ENST00000420524 766 ntBASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 AC092580.1-201ENST00000433998 658 ntBASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 AC090820.1-201ENST00000519722 591 ntBASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.26□□□□□ -0.45
CCDC168Q8NDH2 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 TMBIM7P-202ENST00000641474 1516 ntBASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 CCL25-202ENST00000315626 450 ntTSL 2 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 AC011270.2-201ENST00000624293 2550 ntBASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 AC136604.1-202ENST00000425471 771 ntBASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 HIST1H2APS2-201ENST00000454426 370 ntBASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 AC124068.2-201ENST00000569473 1109 ntBASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CCDC168Q8NDH2 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CCDC168Q8NDH2 AC127383.1-201ENST00000444697 1800 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms